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BaseInfo

ncRNA ID novel_gma_miR6774
Species Glycine max
Class miRNA
Genome position Chr6:23080836-23080999 [+]
Reference genome Glycine_max_v2.0
Source SRR1451604
Length 21
Mature sequence(if miRNA) 144 - CUCUUGGAGGAACUUGAUCCC - 164
Stem-loop(if miRNA) --      C  A          UACU        --        CUA  C     C  C                 AGUA    A
  GAUCAA UU CUCCAAGAGU    CUUUAAGA  GUUACUCC   UC UCAUC UU AUUUUCUUGAAAUUUAA    GUUA U
  |||||| || ||||||||||    ||||||||  ||||||||   || ||||| || |||||||||||||||||    ||||
  CUAGUU AA GAGGUUCUCA    GAAAUUCU  UAAUGAGG   AG AGUGG AA UAAAAGAACUUUAGAUU    CAAU C
CC      C  G          --UU        AU        AGC  A     U  C                 --AC    U
Stem-loop sequence GAUCAACUUACUCCAAGAGUUACUCUUUAAGAGUUACUCCCUAUCCUCAUCCUUCAUUUUCUUGAAAUUUAAAGUAGUUAAUCUUAACCAUUAGAUUUCAAGAAAAUCAAUGGUGAAGACGAGGAGUAAUUAUCUUAAAGUUACUCUUGGAGGAACUUGAUCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT099117.1
ncRNA:21   CCCUAGUUCAAGGAGGUUCUC   1
  ****||||||||||||||||*
targets:673   CUUUUCAAGUUCCUCCAAGAC   693

3.0 Soybean clone JCVI-FLGm-23L13 unknown mRNA NA coding protein psRNATarget