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BaseInfo

ncRNA ID	novel_gma_miR6769
Species	Glycine max
Class	miRNA
Genome position	Chr5:2443825-2443944 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451604
Length	20
Mature sequence(if miRNA)	101 - AUGGAUACAUAACUUUGGUC - 120
Stem-loop(if miRNA)	--         G       UCUCUU     -U  AAC   UUUUUAUGGGUCAUGUUAGGUGA   CCAAAGUUG UGUAUUU      UAAGU  AG   CUC                       U   ||||||||| |||||||      |||||  ||   |||                       A   GGUUUCAAU ACAUAGG      AUUCA  UC   GUC                       G CU         -       -----U     UU  AUU   AGGUGAUUUGAGAGAGUACCCAC
Stem-loop sequence	CCAAAGUUGGUGUAUUUUCUCUUUAAGUUAGAACCUCUUUUUAUGGGUCAUGUUAGGUGAUAGCACCCAUGAGAGAGUUUAGUGGACUGUUACUUUACUUAUGGAUACAUAACUUUGGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT094539.1	ncRNA:20   CUGGUUUCAAUACAUAGGUA   1   ||=|=||||||||||||||* targets:410   GAUCGAAGUUAUGUAUCCAA   429 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-18F8 unknown mRNA	NA	coding protein	psRNATarget
AK286218.1	ncRNA:20   CUGGUUUCAAUACAUAGGUA   1   ||=|=||||||||||||||* targets:400   GAUCGAAGUUAUGUAUCCAA   419 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-24-C11	NA	coding protein	psRNATarget
BT097774.1	ncRNA:20   CUGGUUUCAAUACAUAGGUA   1   ||=|=||||||||||||||* targets:338   GAUCGAAGUUAUGUAUCCAA   357 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-22D13 unknown mRNA	NA	coding protein	psRNATarget
XM_003531186.3	ncRNA:20   CUGGUUUCAAUACAUAGGUA   1   ||=|=||||||||||||||* targets:631   GAUCGAAGUUAUGUAUCCAA   650 Target Full Sequence	3.0	PREDICTED: Glycine max F-box/kelch-repeat protein At1g55270 (LOC100796811), mRNA	F-box/kelch-repeat protein At1g55270(LOC100796811)	coding protein	psRNATarget
XM_003524898.3	ncRNA:20   CUGGUUUCAAUACAUAGGUA   1   ||=|=||||||||||||||* targets:625   GAUCGAAGUUAUGUAUCCAA   644 Target Full Sequence	3.0	PREDICTED: Glycine max F-box/kelch-repeat protein At1g55270 (LOC100780827), transcript variant X1, mRNA	F-box/kelch-repeat protein At1g55270(LOC100780827)	coding protein	psRNATarget
XM_006580091.2	ncRNA:20   CUGGUUUCAAUACAUAGGUA   1   ||=|=||||||||||||||* targets:638   GAUCGAAGUUAUGUAUCCAA   657 Target Full Sequence	3.0	PREDICTED: Glycine max F-box/kelch-repeat protein At1g55270 (LOC100780827), transcript variant X2, mRNA	F-box/kelch-repeat protein At1g55270(LOC100780827)	coding protein	psRNATarget
XM_003524899.3	ncRNA:20   CUGGUUUCAAUACAUAGGUA   1   ||=|=||||||||||||||* targets:647   GAUCGAAGUUAUGUAUCCAA   666 Target Full Sequence	3.0	PREDICTED: Glycine max F-box/kelch-repeat protein At1g55270 (LOC100780827), transcript variant X3, mRNA	F-box/kelch-repeat protein At1g55270(LOC100780827)	coding protein	psRNATarget