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BaseInfo

ncRNA ID novel_gma_miR6763
Species Glycine max
Class miRNA
Genome position Chr1:7741210-7741272 [+]
Reference genome Glycine_max_v2.0
Source SRR1295531
Length 24
Mature sequence(if miRNA) 40 - AGAGGAAUGUUGAACUUGGGCCUG - 63
Stem-loop(if miRNA) --   A     -A        AG   -C    C
  GGU CCAAG  CAACAUUC  CUU  GAAA A
  ||| |||||  ||||||||  |||  ||||
  CCG GGUUC  GUUGUAAG  GAG  CUUU U
GU   -     AA        GA   UC    C
Stem-loop sequence GGUACCAAGACAACAUUCAGCUUCGAAACAUCUUUCCUGAGAGGAAUGUUGAACUUGGGCCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003553513.3
ncRNA:24   GUCCGGGUUCAAGUUGUAAGGAGA   1
  |||*||||||*||||||||=||||
targets:28   CAGACCCAAGAUCAACAUUUCUCU   51

2.5 PREDICTED: Glycine max uncharacterized LOC100798313 (LOC100798313), mRNA uncharacterized LOC100798313(LOC100798313) coding protein psRNATarget
XM_006587144.2
ncRNA:24   GUCCGGGUUCAAGUUGUAAGGAGA   1
  *|||*||||*|||||=||||||||
targets:946   GAGGACCAAAUUCAAUAUUCCUCU   969

2.5 PREDICTED: Glycine max probable L-type lectin-domain containing receptor kinase S.5 (LOC100790353), mRNA probable L-type lectin-domain containing receptor kinase S.5(LOC100790353) coding protein psRNATarget
XM_006573028.2
ncRNA:24   GUCCGGGUUCAAGUUGUAAGGAGA   1
  =***||*|||||||||||||||=|
targets:112   UCCUCCAAAGUUCAACAUUCCUUU   135

2.5 PREDICTED: Glycine max single-stranded DNA-binding protein WHY1, chloroplastic-like (LOC100797370), transcript variant X2, mRNA single-stranded DNA-binding protein WHY1, chloroplastic-like(LOC100797370) coding protein psRNATarget
XM_003517723.3
ncRNA:24   GUCCGGGUUCAAGUUGUAAGGAGA   1
  =***||*|||||||||||||||=|
targets:110   UCCUCCAAAGUUCAACAUUCCUUU   133

2.5 PREDICTED: Glycine max single-stranded DNA-binding protein WHY1, chloroplastic-like (LOC100797370), transcript variant X1, mRNA single-stranded DNA-binding protein WHY1, chloroplastic-like(LOC100797370) coding protein psRNATarget
XM_006573029.2
ncRNA:24   GUCCGGGUUCAAGUUGUAAGGAGA   1
  =***||*|||||||||||||||=|
targets:111   UCCUCCAAAGUUCAACAUUCCUUU   134

2.5 PREDICTED: Glycine max single-stranded DNA-binding protein WHY1, chloroplastic-like (LOC100797370), transcript variant X3, mRNA single-stranded DNA-binding protein WHY1, chloroplastic-like(LOC100797370) coding protein psRNATarget