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BaseInfo

ncRNA ID	novel_gma_miR6762
Species	Glycine max
Class	miRNA
Genome position	Chr9:39711112-39711324 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1295531
Length	24
Mature sequence(if miRNA)	190 - AUAAAGACUAAAAACGUAAGAGCC - 213
Stem-loop(if miRNA)	--       UUUUU   G     UAAUUUGAAAGUGAUAUUUUUAGUCUUUAUAGUUUCAUAAUUCUUAAUUUUUUAGUCCUUAUAAUUUUCAAAUUACAGAUAUUAAA   UUCUUAU     UUA UUUUA                                                                                      A   |||||||     ||| |||||   GAGAAUG     AAA AAUCA                                                                                      A CC       ----C   -     GAAAUAUCAAGUAUAAAAUUAAAAAAAAAUCAAGAAAUAUCAAAUUUUUACAAGAAAAAUCAGGAGUAGCAAAUAUAAAAUUAAGA
Stem-loop sequence	UUCUUAUUUUUUUUAGUUUUAUAAUUUGAAAGUGAUAUUUUUAGUCUUUAUAGUUUCAUAAUUCUUAAUUUUUUAGUCCUUAUAAUUUUCAAAUUACAGAUAUUAAAAAAGAAUUAAAAUAUAAACGAUGAGGACUAAAAAGAACAUUUUUAAACUAUAAAGAACUAAAAAAAAAUUAAAAUAUGAACUAUAAAGACUAAAAACGUAAGAGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006600705.2	ncRNA:24   CCGAGAAUGCAAAAAUCAGAAAUA   1   |*=|=||||*||||||||=||||| targets:1719   GAUUUUUACUUUUUUAGUUUUUAU   1742 Target Full Sequence	2.5	PREDICTED: Glycine max sodium/pyruvate cotransporter BASS2, chloroplastic (LOC100800727), transcript variant X1, mRNA	sodium/pyruvate cotransporter BASS2, chloroplastic(LOC100800727)	coding protein	psRNATarget
XM_014769889.1	ncRNA:24   CCGAGAAUGCAAAAAUCAGAAAUA   1   |*=|=||||*||||||||=||||| targets:1297   GAUUUUUACUUUUUUAGUUUUUAU   1320 Target Full Sequence	2.5	PREDICTED: Glycine max sodium/pyruvate cotransporter BASS2, chloroplastic (LOC100800727), transcript variant X2, mRNA	sodium/pyruvate cotransporter BASS2, chloroplastic(LOC100800727)	coding protein	psRNATarget