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BaseInfo

ncRNA ID novel_gma_miR6754
Species Glycine max
Class miRNA
Genome position Chr6:39823331-39823401 [+]
Reference genome Glycine_max_v2.0
Source SRR1295531
Length 24
Mature sequence(if miRNA) 48 - GGGAAUUAAAAUGUAAACUUCAGG - 71
Stem-loop(if miRNA) --                      AAAAUUU       A
  UGAAGUUUACAUUUUAAUUUCC       UAAUGGU G
  ||||||||||||||||||||||       |||||||
  ACUUCAAAUGUAAAAUUAAGGG       GUUACCA G
GG                      -------       A
Stem-loop sequence UGAAGUUUACAUUUUAAUUUCCAAAAUUUUAAUGGUAGGAACCAUUGGGGAAUUAAAAUGUAAACUUCAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006577048.2
ncRNA:24   GGACUUCAAAUGUAAAAUUAAGGG   1
  |||**|||||||||||||||||=|
targets:1931   CCUAUAGUUUACAUUUUAAUUCUC   1954

1.5 PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA uncharacterized LOC100819268(LOC100819268) coding protein psRNATarget
XM_014773932.1
ncRNA:24   GGACUUCAAAUGUAAAAUUAAGGG   1
  |||**|||||||||||||||||=|
targets:2041   CCUAUAGUUUACAUUUUAAUUCUC   2064

1.5 PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA uncharacterized LOC100819268(LOC100819268) coding protein psRNATarget