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BaseInfo

ncRNA ID novel_gma_miR6750
Species Glycine max
Class miRNA
Genome position Chr5:2115022-2115077 [-]
Reference genome Glycine_max_v2.0
Source SRR1295531
Length 24
Mature sequence(if miRNA) 33 - AACUUGAUCCGUAAGCCUUUUAUG - 56
Stem-loop(if miRNA) --AA       C            UGAA
    CUUGAUC GUAAGCCUUUUA    U
    ||||||| ||||||||||||
    GAAUUAG CGUUCGGAAAAU    C
AUGG       A            UCAA
Stem-loop sequence AACUUGAUCCGUAAGCCUUUUAUGAAUCAACUUAAAAGGCUUGCAGAUUAAGGGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768353.1
ncRNA:24   GUAUUUUCCGAAUGCCUAGUUCAA   1
  |=*|||||**||||||||||||||
targets:584   CGCAAAAGAAUUACGGAUCAAGUU   607

2.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_006600975.2
ncRNA:24   GUAUUUUCCGAAUGCCUAGUUCAA   1
  |=||||||*||||||||||||*||
targets:1241   CGUAAAAGCCUUACGGAUCAACUU   1264

2.5 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget