ncRNA ID | novel_gma_miR6749 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:44305747-44305840 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295531 |
Length | 24 |
Mature sequence(if miRNA) | 71 - AAGAAGAUUGAAGAAUUUAUGUCU - 94 |
Stem-loop(if miRNA) |
AAGAA    GA          --         G ---UC     AAAU      GAUU  AGAAUUUAUG  UCUUUCAUG A     AAGGU    U      ||||  ||||||||||  ||||||||| |     |||||    C      CUAG  UCUUAGAUAC  AGAGAGUAU U     UUUCA    U CAUUC    AA          UA         G UAAAC     CUCA |
Stem-loop sequence | AAGAAGAUUGAAGAAUUUAUGUCUUUCAUGGAUCAAGGUAAAUUCUACUCACUUUCAAAUUGUAUGAGAGAAUCAUAGAUUCUAAGAUCCUUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006578471.2 |
|
1.5 | PREDICTED: Glycine max 60S ribosomal protein L31-like (LOC100787918), transcript variant X1, mRNA | 60S ribosomal protein L31-like(LOC100787918) | coding protein | psRNATarget | |||||||||
XM_003536982.2 |
|
2.5 | PREDICTED: Glycine max pectinesterase-like (LOC100800413), mRNA | pectinesterase-like(LOC100800413) | coding protein | psRNATarget |