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BaseInfo

ncRNA ID novel_gma_miR6749
Species Glycine max
Class miRNA
Genome position Chr4:44305747-44305840 [-]
Reference genome Glycine_max_v2.0
Source SRR1295531
Length 24
Mature sequence(if miRNA) 71 - AAGAAGAUUGAAGAAUUUAUGUCU - 94
Stem-loop(if miRNA) AAGAA    GA          --         G ---UC     AAAU
     GAUU  AGAAUUUAUG  UCUUUCAUG A     AAGGU    U
     ||||  ||||||||||  ||||||||| |     |||||    C
     CUAG  UCUUAGAUAC  AGAGAGUAU U     UUUCA    U
CAUUC    AA          UA         G UAAAC     CUCA
Stem-loop sequence AAGAAGAUUGAAGAAUUUAUGUCUUUCAUGGAUCAAGGUAAAUUCUACUCACUUUCAAAUUGUAUGAGAGAAUCAUAGAUUCUAAGAUCCUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006578471.2
ncRNA:24   UCUGUAUUUAAGAAGUUAGAAGAA   1
  **|*=|||||||||||||=|||||
targets:1202   UAAAGUAAAUUCUUCAAUUUUCUU   1225

1.5 PREDICTED: Glycine max 60S ribosomal protein L31-like (LOC100787918), transcript variant X1, mRNA 60S ribosomal protein L31-like(LOC100787918) coding protein psRNATarget
XM_003536982.2
ncRNA:24   UCUGUAUUUAAGAAGUUAGAAGAA   1
  |***||||*|||||||=|||||||
targets:45   AUUGAUAAUUUCUUCAGUCUUCUU   68

2.5 PREDICTED: Glycine max pectinesterase-like (LOC100800413), mRNA pectinesterase-like(LOC100800413) coding protein psRNATarget