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BaseInfo

ncRNA ID novel_gma_miR6748
Species Glycine max
Class miRNA
Genome position Chr4:20320331-20320382 [+]
Reference genome Glycine_max_v2.0
Source SRR1295531
Length 24
Mature sequence(if miRNA) 29 - UAAAAAAAUUGAGGAUUCUAAGAC - 52
Stem-loop(if miRNA) --                  AAAAAA
  UUUAGAAUUCUCAAUUUU      A
  ||||||||||||||||||
  GAAUCUUAGGAGUUAAAA      G
CA                  AAAUUA
Stem-loop sequence UUUAGAAUUCUCAAUUUUAAAAAAAGAUUAAAAAAAUUGAGGAUUCUAAGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003518685.3
ncRNA:24   CA-GAAUCUUAGGAGUUAAAAAAAU   1
  ||-||*||||*||||||||||||||
targets:2759   GUACUAAGAAACCUCAAUUUUUUUA   2783

1.0 PREDICTED: Glycine max beta-1,3-galactosyltransferase 15-like (LOC100782548), mRNA beta-1,3-galactosyltransferase 15-like(LOC100782548) coding protein psRNATarget
XM_006583464.2
ncRNA:24   CAGA------AUCUUAGGAGUUAAAAAAAU   1
  *|||------|=||||=|||||||||||||
targets:2678   AUCUAAGAUGUGGAAUUCUCAAUUUUUUUA   2707

2.0 PREDICTED: Glycine max uncharacterized LOC102670121 (LOC102670121), transcript variant X1, mRNA uncharacterized LOC102670121(LOC102670121) coding protein psRNATarget
XM_006587305.2
ncRNA:24   CA-GAAUCUUAGGAGUUAAAAAAAU   1
  ||-||*||||*|||||||||||||*
targets:1443   GUACUAAGAAACCUCAAUUUUUUUU   1467

2.0 PREDICTED: Glycine max kinesin-like protein KIN12A (LOC102663290), transcript variant X1, mRNA kinesin-like protein KIN12A(LOC102663290) coding protein psRNATarget
XM_006572889.2
ncRNA:24   CA-GAAUCUUAGGAGUUAAAAAAAU   1
  ||-||*||||*|||||||||||||*
targets:1461   GUACUAAGAAACCUCAAUUUUUUUU   1485

2.0 PREDICTED: Glycine max kinesin-like protein KIN12A (LOC100817437), transcript variant X1, mRNA kinesin-like protein KIN12A(LOC100817437) coding protein psRNATarget