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BaseInfo

ncRNA ID novel_gma_miR6745
Species Glycine max
Class miRNA
Genome position Chr4:36511209-36511270 [-]
Reference genome Glycine_max_v2.0
Source SRR1295531
Length 24
Mature sequence(if miRNA) 39 - UUUUUUAGAAUGCUGGGUGCACCA - 62
Stem-loop(if miRNA) --     U  -AA             -    A
  UUUUU AG   UGCUGGGUGCACC AGCA U
  ||||| ||   ||||||||||||| ||||
  AAAAA UC   ACGAUCCACGUGG UCGU A
UA     C  ACA             G    A
Stem-loop sequence UUUUUUAGAAUGCUGGGUGCACCAGCAAUAAUGCUGGGUGCACCUAGCAACACUCAAAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003552064.3
ncRNA:24   ACCACGUGGGUCGUAAGAUUUUUU   1
  ||||||||||||||||||||||||
targets:1492   UGGUGCACCCAGCAUUCUAAAAAA   1515

0.0 PREDICTED: Glycine max FHA domain-containing protein FHA2-like (LOC100787361), mRNA FHA domain-containing protein FHA2-like(LOC100787361) coding protein psRNATarget
XM_006592057.2
ncRNA:24   ACCACGUGGGUCGUAAGAUUUUUU   1
  |**|*|||=|||||||||*|||||
targets:1867   UUAUCCACUCAGCAUUCUUAAAAA   1890

2.5 PREDICTED: Glycine max long chain acyl-CoA synthetase 2-like (LOC100790068), transcript variant X2, mRNA long chain acyl-CoA synthetase 2-like(LOC100790068) coding protein psRNATarget
XM_003540636.3
ncRNA:24   ACCACGUGGGUCGUAAGAUUUUUU   1
  |**|*|||=|||||||||*|||||
targets:2380   UUAUCCACUCAGCAUUCUUAAAAA   2403

2.5 PREDICTED: Glycine max long chain acyl-CoA synthetase 2-like (LOC100790068), transcript variant X1, mRNA long chain acyl-CoA synthetase 2-like(LOC100790068) coding protein psRNATarget