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BaseInfo

ncRNA ID novel_gma_miR6742
Species Glycine max
Class miRNA
Genome position Chr3:899786-899848 [-]
Reference genome Glycine_max_v2.0
Source SRR1295531;SRR1451609
Length 24
Mature sequence(if miRNA) 40 - UCAGAGAGGCAACGUCGGCUUAUC - 63
Stem-loop(if miRNA) ----  AGA       CG        ---U   GU
    UC   GAGGCAA  UCGGCUUA    CAA  A
    ||   |||||||  ||||||||    |||
    AG   CUCUGUU  AGCUGAGU    GUU  G
GGAG  --G       AU        UCCU   AA
Stem-loop sequence UCAGAGAGGCAACGUCGGCUUAUCAAGUAGAAUUGUCCUUGAGUCGAUAUUGUCUCGGAGAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003536878.3
ncRNA:24   CUAUUCGGCUGCAACGGAGAGACU   1
  *|*|*|=||||||||||*||||||
targets:382   AACACGUCGACGUUGCCACUCUGA   405

2.5 PREDICTED: Glycine max fructokinase-1-like (LOC100818899), mRNA fructokinase-1-like(LOC100818899) coding protein psRNATarget