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BaseInfo

ncRNA ID novel_gma_miR6740
Species Glycine max
Class miRNA
Genome position Chr20:44990099-44990256 [-]
Reference genome Glycine_max_v2.0
Source SRR1295531;SRR1292928
Length 24
Mature sequence(if miRNA) 1 - AAUAAGAACAUGACACGUGACAGU - 24
Stem-loop(if miRNA) --            C         A   GAUAAC                        UCAAUGAAAACAACA   -  -      C
  UGUCAUGUGUCA GUUCUUAUU GAU      UGUCAUGUGUCAUGUUCUGAUUGG               AUG CA UUUCAU U
  |||||||||||| ||||||||| |||      ||||||||||||||||||||||||               ||| || |||||| U
  ACAGUGCACAGU CAAGAAUAA CUA      ACAGUACACAGUACAAGACUAACC               UAC GU GAGGUA U
UG            A         A   AUACUA                        ---------------   A  U      C
Stem-loop sequence UGUCAUGUGUCACGUUCUUAUUAGAUGAUAACUGUCAUGUGUCAUGUUCUGAUUGGUCAAUGAAAACAACAAUGCAUUUCAUCUUUCAUGGAGUUGACAUCCAAUCAGAACAUGACACAUGACAAUCAUAAUCAAAUAAGAACAUGACACGUGACAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242574.1
ncRNA:24   UGACAGUGCACAGUACAAGAAUAA   1
  ||||||||||||||||||||*|||
targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39

1.5 Sequence 8569 from Patent EP2985353 NA coding protein psRNATarget
HI410444.1
ncRNA:24   UGACAGUGCACAGUACAAGAAUAA   1
  ||||||||||||||||||||*|||
targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39

1.5 Sequence 8569 from Patent EP2074227 NA coding protein psRNATarget
JB170905.1
ncRNA:24   UGACAGUGCACAGUACAAGAAUAA   1
  ||||||||||||||||||||*|||
targets:16   ACUGUCACGUGUCAUGUUCUAAUU   39

1.5 Sequence 8569 from Patent EP2559767 NA coding protein psRNATarget
HI410445.1
ncRNA:24   UGACAGUGCACAGUACAAGAAUAA   1
  ||||||||||||||||||||*|||
targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100

1.5 Sequence 8570 from Patent EP2074227 NA coding protein psRNATarget
JB170906.1
ncRNA:24   UGACAGUGCACAGUACAAGAAUAA   1
  ||||||||||||||||||||*|||
targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100

1.5 Sequence 8570 from Patent EP2559767 NA coding protein psRNATarget
LQ242575.1
ncRNA:24   UGACAGUGCACAGUACAAGAAUAA   1
  ||||||||||||||||||||*|||
targets:77   ACUGUCACGUGUCAUGUUCUAAUU   100

1.5 Sequence 8570 from Patent EP2985353 NA coding protein psRNATarget