ncRNA ID | novel_gma_miR6735 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:1815523-1815631 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295531 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUUGUGAAUGUGGUCUCUAAGCC - 24 |
Stem-loop(if miRNA) |
--         U          AGCCCAGAC           -     C   --    AU   UUUUGUGAA GUGGUCUCUA         UUAAACGUUAA UGUUA AAA  AACA  C   ||||||||| ||||||||||         ||||||||||| ||||| |||  ||||   AAGGCAUUU UACCAGAGGU         AAUUUGUAAUU AUAAU UUU  UUGU  A UU         C          --------A           G     A   CC    AU |
Stem-loop sequence | UUUUGUGAAUGUGGUCUCUAAGCCCAGACUUAAACGUUAAUGUUACAAAAACAAUCAUAUGUUCCUUUAUAAUAGUUAAUGUUUAAAUGGAGACCAUCUUUACGGAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006590741.2 |
|
1.0 | PREDICTED: Glycine max endoglucanase 5-like (LOC100812170), mRNA | endoglucanase 5-like(LOC100812170) | coding protein | psRNATarget | |||||||||
XM_003539966.1 |
|
3.0 | PREDICTED: Glycine max ervatamin-B-like (LOC100817873), mRNA | ervatamin-B-like(LOC100817873) | coding protein | psRNATarget | |||||||||
XM_003539965.2 |
|
3.0 | PREDICTED: Glycine max ervatamin-B-like (LOC100817340), mRNA | ervatamin-B-like(LOC100817340) | coding protein | psRNATarget | |||||||||
XM_006582201.1 |
|
3.0 | PREDICTED: Glycine max zingipain-2-like (LOC100807398), mRNA | zingipain-2-like(LOC100807398) | coding protein | psRNATarget |