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BaseInfo

ncRNA ID novel_gma_miR6733
Species Glycine max
Class miRNA
Genome position Chr1:7561844-7561891 [-]
Reference genome Glycine_max_v2.0
Source SRR1295531;SRR1292928
Length 22
Mature sequence(if miRNA) 1 - AGGACUGUGGUCGCUGCUCAAA - 22
Stem-loop(if miRNA) --    -   -U     A     UG
  UGGG AGC  UUACA UCUUG  U
  |||| |||  ||||| |||||
  ACUC UCG  GGUGU AGGAU  U
AA    G   CU     C     CC
Stem-loop sequence UGGGAGCUUUACAAUCUUGUGUUCCUAGGACUGUGGUCGCUGCUCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003521324.3
ncRNA:22   AAACUCGUCGCUGGUGUCAGGA   1
  ***||||=||||||||||*|||
targets:286   CGAGAGCGGCGACCACAGCCCU   307

2.5 PREDICTED: Glycine max nuclear transcription factor Y subunit B-10 (LOC100820170), mRNA nuclear transcription factor Y subunit B-10(LOC100820170) coding protein psRNATarget