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BaseInfo

ncRNA ID	novel_gma_miR6730
Species	Glycine max
Class	miRNA
Genome position	Chr11:34620856-34620938 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1295531
Length	24
Mature sequence(if miRNA)	60 - UAGAAUGAAUAAUGUGAGAGGCCU - 83
Stem-loop(if miRNA)	--       A    U     A   CUAA    A   AAA  C   UAGAAUG AUAA GUGAG GGC    CUCA CCC   AG U   ||||||| |||| ||||| |||    |||| |||   ||   AUCUUAU UAUU CACUC CCG    GAGU GGG   UC A AA       A    -     C   UUGG    G   AAC  G
Stem-loop sequence	UAGAAUGAAUAAUGUGAGAGGCCUAACUCAACCCAAAAGCUAGCUCAAGGGGUGAGGGUUGCCCCUCACUUAUAUAUUCUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014767021.1	ncRNA:19   AGAGUGUAAUAAGUAAGAU   1   |=||||||||||||||||| targets:1   UUUCACAUUAUUCAUUCUA   19 Target Full Sequence	1.0	PREDICTED: Glycine max mitogen-activated protein kinase kinase kinase 1-like (LOC100798028), mRNA	mitogen-activated protein kinase kinase kinase 1-like(LOC100798028)	coding protein	psRNATarget
XM_003524077.3	ncRNA:24   UCCGGAG-AGUGUAAUAAGUAAGAU   1   ***||||-||||||||||||||||| targets:108   UUUCCUCGUCACAUUAUUCAUUCUA   132 Target Full Sequence	2.0	PREDICTED: Glycine max copper-transporting ATPase RAN1-like (LOC100798164), mRNA	copper-transporting ATPase RAN1-like(LOC100798164)	coding protein	psRNATarget
XM_003523819.3	ncRNA:24   UCCGGAGAGUGUAAUAAGUAAGAU   1   ****||=|=||||||||||||||| targets:2521   UACACUUUUACAUUAUUCAUUCUA   2544 Target Full Sequence	2.0	PREDICTED: Glycine max probable mitochondrial intermediate peptidase, mitochondrial (LOC100794972), mRNA	probable mitochondrial intermediate peptidase, mitochondrial(LOC100794972)	coding protein	psRNATarget
XM_003555383.3	ncRNA:24   UCC--GGAGAGUGUAAUAAGUAAGAU   1   *||--|||||*||*|||||||||||| targets:291   UGGUCCCUCUGACCUUAUUCAUUCUA   316 Target Full Sequence	2.5	PREDICTED: Glycine max beta-taxilin (LOC100815044), mRNA	beta-taxilin(LOC100815044)	coding protein	psRNATarget
XM_003530619.3	ncRNA:24   UCCGGAGAGUGUAAUAAGUAAGAU   1   *|*|||=*||*||||||||||||| targets:2043   UGUCCUUACAAAUUAUUCAUUCUA   2066 Target Full Sequence	3.0	PREDICTED: Glycine max UPF0392 protein RCOM_0530710-like (LOC100785348), mRNA	UPF0392 protein RCOM_0530710-like(LOC100785348)	coding protein	psRNATarget