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BaseInfo

ncRNA ID novel_gma_miR6728
Species Glycine max
Class miRNA
Genome position Chr11:22943513-22943643 [+]
Reference genome Glycine_max_v2.0
Source SRR1295531
Length 24
Mature sequence(if miRNA) 1 - ACCAAAGGUCAUCCGGAAGAACAC - 24
Stem-loop(if miRNA) --  -                   CACG       A    C        ---CAC           A
  AC CAAAGGUCAUCCGGAAGAA    UCUUCCG AAAU UUCUGGAA      CUUCUUCUGGA A
  || |||||||||||||||||||    ||||||| |||| ||||||||      ||||||||||| C
  UG GUUUCCAGUAGGCCUUCUU    AGAAGGC UUUA AAGGCCUU      GAAGAAGACCU U
UA  A                   AAGA       C    A        CUUUAU           U
Stem-loop sequence ACCAAAGGUCAUCCGGAAGAACACGUCUUCCGAAAAUCUUCUGGAACACCUUCUUCUGGAAACUUUCCAGAAGAAGUAUUUCUUCCGGAAAAUUUCCGGAAGAAGAAUUCUUCCGGAUGACCUUUGAGUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014772428.1
ncRNA:24   CACAAGAAGGCCUACUGGAAACCA   1
  |*||||||||||||||||||||**
targets:208   GGGUUCUUCCGGAUGACCUUUGAG   231

2.5 PREDICTED: Glycine max uncharacterized LOC102661169 (LOC102661169), mRNA uncharacterized LOC102661169(LOC102661169) coding protein psRNATarget