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BaseInfo

ncRNA ID novel_gma_miR6716
Species Glycine max
Class miRNA
Genome position Chr3:71302-71350 [-]
Reference genome Glycine_max_v2.0
Source SRR1295530
Length 23
Mature sequence(if miRNA) 27 - UCAAGUUGAUCUGUAUGUUGAUA - 49
Stem-loop(if miRNA) --    G              GAU
  UCAA UUGAUCUGUAUGUU   A
  |||| ||||||||||||||   U
  AGUU AACUAGACAUACGA   U
CU    G              AUU
Stem-loop sequence UCAAGUUGAUCUGUAUGUUGAUAUUUUAAGCAUACAGAUCAAGUUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:23   AUAGUUGUAUGUCUAGUUGAACU   1
  |***|=|||||=|||||||||||
targets:406   UUGAAGCAUACGGAUCAACUUGA   428

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:23   AUAGUUGUAUGUCUAGUUGAACU   1
  |***|=|||||=|||||||||||
targets:1001   UUGAAGCAUACGGAUCAACUUGA   1023

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget