ncRNA ID | novel_gma_miR6711 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:48860184-48860404 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295530 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAGGACGAAAAACAAAAAAGUGCC - 24 |
Stem-loop(if miRNA) |
--         U C          U           A        G              C              C  CA    GAU             A      UUCA   CACUUUUUU G UUUUUGUCCU GCAAAAUUAUU UUUUGUUU UAGUCCUUGCAAAU AUGUUUGUUUUGUU UU  UUCU   GGCGCUUUAGAUA CGUUUU    C   ||||||||| | |||||||||| ||||||||||| |||||||| |||||||||||||| |||||||||||||| ||  ||||   ||||||||||||| ||||||   GUGAAAAAA C AAAAGCAGGA CGUUUUAAUAA AAAACAAA AUUAGGAAUGUUUA UACAAACAAAACAA AA  AAGA   UCGUGAAAUCUAU GCGAAA    A CC         - A          U           A        A              A              A  UC    AUU             C      CUUG |
Stem-loop sequence | CACUUUUUUUGCUUUUUGUCCUUGCAAAAUUAUUAUUUUGUUUGUAGUCCUUGCAAAUCAUGUUUGUUUUGUUCUUCAUUCUGAUGGCGCUUUAGAUAACGUUUUUUCACAGUUCAAAGCGCUAUCUAAAGUGCUUUAAGAACUAAAAACAAAACAAACAUAAUUUGUAAGGAUUAAAAACAAAAAAAUAAUUUUGCUAGGACGAAAAACAAAAAAGUGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK243861.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-01-H07 | NA | coding protein | psRNATarget |