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BaseInfo

ncRNA ID novel_gma_miR6703
Species Glycine max
Class miRNA
Genome position Chr14:33127066-33127233 [-]
Reference genome Glycine_max_v2.0
Source SRR1295530
Length 24
Mature sequence(if miRNA) 145 - UUUUCGGUUGGCUAUAAAAGUGAC - 168
Stem-loop(if miRNA) --UUUUC   UG    U   A       UUCU      A  UU    UG    UUAUA      UUUU       -A  --U  G
       GGU  GCUA AAA GUGACUU    AGUCAU UU  UGGU  GCUA     GUGACU    AAGUCAU  UU   UC G
       |||  |||| ||| |||||||    |||||| ||  ||||  ||||     ||||||    |||||||  ||   || U
       UCG  UGGU UUU UACUGAA    UCAGUG GA  AUCA  UGGU     UACUGA    UUCAGUG  AA   AG U
GAGAAUA   GU    U   A       CUUU      A  UU    GU    UUUUA      UCUU       AG  UAU  G
Stem-loop sequence UUUUCGGUUGGCUAUAAAAGUGACUUUUCUAGUCAUAUUUUUGGUUGGCUAUUAUAGUGACUUUUUAAGUCAUAUUUUCGGUUGGAUAUAAGAGUGACUUUUCUAGUCAUAUUUUUGGUUGACUAUUAGAGUGACUUUUCAAGUCAUAUUUUUGGUUGGCUAUAAGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006589458.2
ncRNA:24   CAGUGAAAAUAUCGGUUGGCUUUU   1
  ||=|||*|||||||||||||||||
targets:784   GUUACUAUUAUAGCCAACCGAAAA   807

1.0 PREDICTED: Glycine max uncharacterized LOC100793876 (LOC100793876), mRNA uncharacterized LOC100793876(LOC100793876) coding protein psRNATarget
XM_006589458.2
ncRNA:24   CAGUGAAAAUAUCGGUUGGCUUUU   1
  ||||||*|*|||||||||||||||
targets:671   GUCACUCUAAUAGCCAACCGAAAA   694

2.0 PREDICTED: Glycine max uncharacterized LOC100793876 (LOC100793876), mRNA uncharacterized LOC100793876(LOC100793876) coding protein psRNATarget
XM_006589458.2
ncRNA:24   CAGUGAAAAUAUCGGUUGGCUUUU   1
  ||||||*||||||||||||*||||
targets:746   GUCACUCUUAUAGCCAACCAAAAA   769

2.5 PREDICTED: Glycine max uncharacterized LOC100793876 (LOC100793876), mRNA uncharacterized LOC100793876(LOC100793876) coding protein psRNATarget