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BaseInfo

ncRNA ID novel_gma_miR6702
Species Glycine max
Class miRNA
Genome position Chr10:29519280-29519432 [+]
Reference genome Glycine_max_v2.0
Source SRR1295530
Length 24
Mature sequence(if miRNA) 1 - CCGUCUUUGAAUGUUAUGUAUACU - 24
Stem-loop(if miRNA) --               -     U  UUU A                         A              -  --  A
  CCGUCUUUGAAUGUU AUGUA AC   G CAUUCAAAGACGGUUAUUAUUUAAU ACCGUCUUUGAAUG CU  GC U
  ||||||||||||||| ||||| ||   | ||||||||||||||||||||||||| |||||||||||||| ||  ||
  GGCAGAAACUUACAG UACGU UG   C GUAAGUUUCUGCCAAUAAUAGAUUA UGGUAGAAACUUAC GG  CG C
CU               C     C  CGU -                         C              A  UU  U
Stem-loop sequence CCGUCUUUGAAUGUUAUGUAUACUUUGACAUUCAAAGACGGUUAUUAUUUAAUAACCGUCUUUGAAUGCUGCAUCUGCUUGGACAUUCAAAGAUGGUCAUUAGAUAAUAACCGUCUUUGAAUGCUGCGUCUGCAUCGACAUUCAAAGACGGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:24   UCAUAUGUAUUGUAAGUUUCUGCC   1
  ||*|*|||||||||||||||||||
targets:1478   AGAAGACAUAACAUUCAAAGACGG   1501

0.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UCAUAUGUAUUGUAAGUUUCUGCC   1
  ||*|*|||||||||||||||=|||
targets:1588   AGAAGACAUAACAUUCAAAGGCGG   1611

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UCAUAUGUAUUGUAAGUUUCUGCC   1
  *|*|*|||||=|||||||||=|||
targets:1643   CGCAGACAUAGCAUUCAAAGGCGG   1666

2.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UCAUAUGUAUUGUAAGUUUCUGCC   1
  ||*|*|*=*|||||||||||||||
targets:1533   AGAAGAAGCAACAUUCAAAGACGG   1556

3.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget