ncRNA ID | novel_gma_miR6702 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:29519280-29519432 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295530 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCGUCUUUGAAUGUUAUGUAUACU - 24 |
Stem-loop(if miRNA) |
--               -     U  UUU A                         A              -  --  A   CCGUCUUUGAAUGUU AUGUA AC   G CAUUCAAAGACGGUUAUUAUUUAAU ACCGUCUUUGAAUG CU  GC U   ||||||||||||||| ||||| ||   | ||||||||||||||||||||||||| |||||||||||||| ||  ||   GGCAGAAACUUACAG UACGU UG   C GUAAGUUUCUGCCAAUAAUAGAUUA UGGUAGAAACUUAC GG  CG C CU               C     C  CGU -                         C              A  UU  U |
Stem-loop sequence | CCGUCUUUGAAUGUUAUGUAUACUUUGACAUUCAAAGACGGUUAUUAUUUAAUAACCGUCUUUGAAUGCUGCAUCUGCUUGGACAUUCAAAGAUGGUCAUUAGAUAAUAACCGUCUUUGAAUGCUGCGUCUGCAUCGACAUUCAAAGACGGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775607.1 |
|
0.0 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
1.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
2.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
3.0 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget |