Search result

BaseInfo

ncRNA ID novel_gma_miR6697
Species Glycine max
Class miRNA
Genome position Chr1:24314683-24314899 [+]
Reference genome Glycine_max_v2.0
Source SRR1295530
Length 24
Mature sequence(if miRNA) 194 - UAACGGUAGGUAGUAAAAUGAAAC - 217
Stem-loop(if miRNA) --         G     GU     A        UA                     G                CA   A    CG     C      A        CC
  UUCAUUUUA UACUU  CGUUA UCAUCUUC  UUAAGUAAUGACGUGACAAAU GAGUGUCACAUCAUCA  CCU GUCA  GACAC UCAUUG CAUGUCAU  C
  ||||||||| |||||  ||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||  ||| ||||  ||||| |||||| ||||||||  U
  AAGUAAAAU AUGGA  GCAAU AGUAGAAG  AAUUCGUUACUGCACUGUUUA UUCACGGUGUAGUAGU  GGA UAGU  CUGUG GGUAAC GUGCGGUA  U
CA         G     UG     C        GC                     A                AC   A    AG     C      A        AC
Stem-loop sequence UUCAUUUUAGUACUUGUCGUUAAUCAUCUUCUAUUAAGUAAUGACGUGACAAAUGGAGUGUCACAUCAUCACACCUAGUCACGGACACCUCAUUGACAUGUCAUCCCUUCAAUGGCGUGACAAUGGCGUGUCGAUGAUAAGGCAUGAUGAUGUGGCACUUAAUUUGUCACGUCAUUGCUUAACGGAAGAUGACUAACGGUAGGUAGUAAAAUGAAAC