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BaseInfo

ncRNA ID	novel_gma_miR6689
Species	Glycine max
Class	miRNA
Genome position	Chr2:488979-489102 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1295529
Length	24
Mature sequence(if miRNA)	101 - AGGUAGUGGCGAUUGAUGAUGGGG - 124
Stem-loop(if miRNA)	--      C  -C               ----CACCUUCA  AUUAUCACUGUUACCACCAUCG   UUAUCA CA  CGUCACUACCUUCAU            UC                      A   |||||| ||  |||||||||||||||            ||                      C   GGUAGU GU  GCGGUGAUGGAAGUA            GC                      A GG      A  UA               ACAAUACUAACA  AACAGCAAUAACAACAGUAUCU
Stem-loop sequence	UUAUCACCACCGUCACUACCUUCAUCACCUUCAUCAUUAUCACUGUUACCACCAUCGACAUCUAUGACAACAAUAACGACAACGACAAUCAUAACAAUGAAGGUAGUGGCGAUUGAUGAUGGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003533820.3	ncRNA:24   GGGGUAGUAGUUAGCGGUGAUGGA   1   ***|||||*|||||||||||||*| targets:559   GAACAUCAGCAAUCGCCACUACAU   582 Target Full Sequence	2.5	PREDICTED: Glycine max transmembrane protein DDB_G0292058-like (LOC100797376), transcript variant X1, mRNA	transmembrane protein DDB_G0292058-like(LOC100797376)	coding protein	psRNATarget
XM_006587069.2	ncRNA:24   GGGGUAGUAGUUAGCGGUGAUGGA   1   ***|||||*|||||||||||||*| targets:427   GAACAUCAGCAAUCGCCACUACAU   450 Target Full Sequence	2.5	PREDICTED: Glycine max transmembrane protein DDB_G0292058-like (LOC100797376), transcript variant X2, mRNA	transmembrane protein DDB_G0292058-like(LOC100797376)	coding protein	psRNATarget
AK285428.1	ncRNA:24   GGGGUAGUAGUUAGCGGUGAUGGA   1   ***|||||*|||||||||||||*| targets:513   GAACAUCAGCAAUCGCCACUACAU   536 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-09-H08	NA	coding protein	psRNATarget
XM_006587071.2	ncRNA:24   GGGGUAGUAGUUAGCGGUGAUGGA   1   ***|||||*|||||||||||||*| targets:561   GAACAUCAGCAAUCGCCACUACAU   584 Target Full Sequence	2.5	PREDICTED: Glycine max transmembrane protein DDB_G0292058-like (LOC100797376), transcript variant X5, mRNA	transmembrane protein DDB_G0292058-like(LOC100797376)	coding protein	psRNATarget
XM_003546543.3	ncRNA:24   GGGGUAGUAGUUAGCGGUGAUGGA   1   ***|||||*|||||||||||||*| targets:525   GAACAUCAGCAAUCGCCACUACAU   548 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100809927 (LOC100809927), mRNA	uncharacterized LOC100809927(LOC100809927)	coding protein	psRNATarget
XM_014762036.1	ncRNA:24   GGGGUAGUAGUUAGCGGUGAUGGA   1   ***|||||*|||||||||||||*| targets:561   GAACAUCAGCAAUCGCCACUACAU   584 Target Full Sequence	2.5	PREDICTED: Glycine max transmembrane protein DDB_G0292058-like (LOC100797376), transcript variant X3, mRNA	transmembrane protein DDB_G0292058-like(LOC100797376)	coding protein	psRNATarget
BT094059.1	ncRNA:24   GGGGUAGUAGUUAGCGGUGAUGGA   1   ***|||||*|||||||||||||*| targets:519   GAACAUCAGCAAUCGCCACUACAU   542 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-18I17 unknown mRNA	NA	coding protein	psRNATarget