ncRNA ID | novel_gma_miR6688 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:7715027-7715131 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295529 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUCACGUUCUCCACUUCUCCUUGA - 24 |
Stem-loop(if miRNA) |
--    C      C       - -   A     -------------AG  U AGA          CUCA GUUCUC ACUUCUC C UUG CUGAG               GC G   GCUGCAGU   |||| |||||| ||||||| | ||| |||||               || |   |||||||A   GAGU CAGGAG UGAGGAG G AAC GAUUU               CG C   CGAUGUCG GA    -      -       U U   -     GGAAUUAGAAUAAAA  - -GG        |
Stem-loop sequence | CUCACGUUCUCCACUUCUCCUUGACUGAGAGGCUGAGAGCUGCAGUAGCUGUAGCGGCGCAAAAUAAGAUUAAGGUUUAGCAAUGUGAGGAGUGAGGACUGAGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773165.1 |
|
1.5 | PREDICTED: Glycine max zinc finger BED domain-containing protein DAYSLEEPER-like (LOC106797883), mRNA | zinc finger BED domain-containing protein DAYSLEEPER-like(LOC106797883) | coding protein | psRNATarget |