ncRNA ID | novel_gma_miR6678 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:8896450-8896537 [-] |
Reference genome | Glycine_max_v2.0 |
Source | DRR031984;SRR1451612;SRR1451618;SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAAUUAGCUAAUGGAGAGCUC - 21 |
Stem-loop(if miRNA) |
--                  C     A CU    C  ---A   U   GCUCUCCAUUAGCUAAUU GUAGA G  CUCU AU    UAG U   |||||||||||||||||| ||||| |  |||| ||    ||| U   CGAGAGGUAAUCGAUUAA CAUCU C  GAGA UA    AUC C CU                  A     A AG    U  GAAA   U |
Stem-loop sequence | GCUCUCCAUUAGCUAAUUCGUAGAAGCUCUCUCAUAUAGUUUCUCUAAAAGAUUAGAGGACAUCUACAAAUUAGCUAAUGGAGAGCUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003525187.3 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100801179 (LOC100801179), mRNA | uncharacterized LOC100801179(LOC100801179) | coding protein | psRNATarget | |||||||||
XM_006594197.2 |
|
2.0 | PREDICTED: Glycine max probable anion transporter 6, chloroplastic (LOC100806856), transcript variant X2, mRNA | probable anion transporter 6, chloroplastic(LOC100806856) | coding protein | psRNATarget | |||||||||
XM_003541440.3 |
|
2.0 | PREDICTED: Glycine max probable anion transporter 6, chloroplastic (LOC100806856), transcript variant X1, mRNA | probable anion transporter 6, chloroplastic(LOC100806856) | coding protein | psRNATarget |