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BaseInfo

ncRNA ID novel_gma_miR6678
Species Glycine max
Class miRNA
Genome position Chr8:8896450-8896537 [-]
Reference genome Glycine_max_v2.0
Source DRR031984;SRR1451612;SRR1451618;SRR1451621
Length 21
Mature sequence(if miRNA) 1 - AAAUUAGCUAAUGGAGAGCUC - 21
Stem-loop(if miRNA) --                  C     A CU    C  ---A   U
  GCUCUCCAUUAGCUAAUU GUAGA G  CUCU AU    UAG U
  |||||||||||||||||| ||||| |  |||| ||    ||| U
  CGAGAGGUAAUCGAUUAA CAUCU C  GAGA UA    AUC C
CU                  A     A AG    U  GAAA   U
Stem-loop sequence GCUCUCCAUUAGCUAAUUCGUAGAAGCUCUCUCAUAUAGUUUCUCUAAAAGAUUAGAGGACAUCUACAAAUUAGCUAAUGGAGAGCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003525187.3
ncRNA:21   CUCGAGAGGUAAUCGAUUAAA   1
  |||=|||=|||||||||||||
targets:1848   GAGUUCUUCAUUAGCUAAUUU   1868

2.0 PREDICTED: Glycine max uncharacterized LOC100801179 (LOC100801179), mRNA uncharacterized LOC100801179(LOC100801179) coding protein psRNATarget
XM_006594197.2
ncRNA:21   CUCGAGAGGUAAUCGAUUAAA   1
  *||=|=|||||||||||||||
targets:795   AAGUUUUCCAUUAGCUAAUUU   815

2.0 PREDICTED: Glycine max probable anion transporter 6, chloroplastic (LOC100806856), transcript variant X2, mRNA probable anion transporter 6, chloroplastic(LOC100806856) coding protein psRNATarget
XM_003541440.3
ncRNA:21   CUCGAGAGGUAAUCGAUUAAA   1
  *||=|=|||||||||||||||
targets:795   AAGUUUUCCAUUAGCUAAUUU   815

2.0 PREDICTED: Glycine max probable anion transporter 6, chloroplastic (LOC100806856), transcript variant X1, mRNA probable anion transporter 6, chloroplastic(LOC100806856) coding protein psRNATarget