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BaseInfo

ncRNA ID	novel_gma_miR6676
Species	Glycine max
Class	miRNA
Genome position	Chr10:25458893-25459069 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1295527
Length	24
Mature sequence(if miRNA)	1 - AGAGGACCGAUGUAGAAUGAUAAU - 24
Stem-loop(if miRNA)	--                                  C                  A          UUGAA          C AU  UC   AGAGGACCGAUGUAGAAUGAUAAUGAUUCUAAGA GGUCCUGCACCGAAGACC UCUUAGAAUG     CAUUCUACAU G  UC  A   |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||     |||||||||| |  ||   UCUCCUGGUUACAUCUUACUAUUGCUAAGAUUCU CCAGGACGUGGCUUCUGG AGAAUCUUAC     GUAAGAUGUA C  AG  U AC                                  A                  C          UAAUC          A -C  UA
Stem-loop sequence	AGAGGACCGAUGUAGAAUGAUAAUGAUUCUAAGACGGUCCUGCACCGAAGACCAUCUUAGAAUGUUGAACAUUCUACAUCGAUUCUCAUAUGACCAAUGUAGAAUGCUAAUCAUUCUAAGACGGUCUUCGGUGCAGGACCAUCUUAGAAUCGUUAUCAUUCUACAUUGGUCCUCUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006598094.2	ncRNA:24   UA---AUAGUAAGAUGUAGCCAGGAGA   1   ||---||*||||||||||||||||||* targets:929   AUGCAUAGCAUUCUACAUCGGUCCUCA   955 Target Full Sequence	1.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X20, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768221.1	ncRNA:24   UA---AUAGUAAGAUGUAGCCAGGAGA   1   ||---||*||||||||||||||||||* targets:1042   AUGCAUAGCAUUCUACAUCGGUCCUCA   1068 Target Full Sequence	1.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X21, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768217.1	ncRNA:24   UA---AUAGUAAGAUGUAGCCAGGAGA   1   ||---||*||||||||||||||||||* targets:1202   AUGCAUAGCAUUCUACAUCGGUCCUCA   1228 Target Full Sequence	1.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X9, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768216.1	ncRNA:24   UA---AUAGUAAGAUGUAGCCAGGAGA   1   ||---||*||||||||||||||||||* targets:1479   AUGCAUAGCAUUCUACAUCGGUCCUCA   1505 Target Full Sequence	1.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X8, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768212.1	ncRNA:24   UA---AUAGUAAGAUGUAGCCAGGAGA   1   ||---||*||||||||||||||||||* targets:1642   AUGCAUAGCAUUCUACAUCGGUCCUCA   1668 Target Full Sequence	1.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X1, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget