ncRNA ID | novel_gma_miR6661 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:4719680-4719917 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295527 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CAAAGUCUGCCUAGUAUCCACC - 22 |
Stem-loop(if miRNA) |
--          C                A     A                                 G  A        A    AA  A    -U   GAC     A    -G GA  G   CAAAGUCUGC UAGUAUCCACCUUACC UCUGA UUCAGAUUUCUUGAGAAAGAAUGUUCCUUGCCA GA UGCCUCUA GGAG  GG GUGA  AGU   CUUUG AGAG  G  AG A   |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| || |||||||| ||||  || ||||  |||   ||||| ||||  |  ||   GUUUCAGACG AUCAUAGGUGGGAUGG AGACU AAGUCUAAAGAACUCUUUUUUACAGGGAACGGU CU ACGGAGAU CUUU  UC CACU  UCG   GGAAC UCUU  U  UC G AC          U                G     C                                 A  A        -    AA  -    UU   AAC     A    GA AG  G |
Stem-loop sequence | CAAAGUCUGCCUAGUAUCCACCUUACCAUCUGAAUUCAGAUUUCUUGAGAAAGAAUGUUCCUUGCCAGGAAUGCCUCUAAGGAGAAGGAGUGAUAGUGACCUUUGAAGAGGGGAAGGAGGCUGAUAGUUCUACAAGGCAAGCUUUUCACCUAAUUUCUAGAGGCAAUCAUGGCAAGGGACAUUUUUUCUCAAGAAAUCUGAACUCAGAGGGUAGGGUGGAUACUAUGCAGACUUUGCA |