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BaseInfo

ncRNA ID ahy-miR3518
Species Arachis hypogaea
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGACCUUUGGGGAUAUUCGUG - NA
Stem-loop(if miRNA) GCUAAGCGACAA           A    AU  A         A     U           A          A   G  AAG    U
            UAAUUUGAGAG UAAU  GU ACGAGUAUC CCAAA GUCACUCUUUU GAUUUGUCUU UUA UU   GAGU G
            ||||||||||| ||||  || ||||||||| ||||| ||||||||||| |||||||||| ||| ||   ||||
            AUUAAACUCUU AUUA  CG UGCUUAUAG GGUUU CAGUGAGAAAA UUAAAUAGGA AAU AA   UUCA C
------------           C    CU  G         G     C           -          -   G  GUA    A
Stem-loop sequence GCUAAGCGACAAUAAUUUGAGAGAUAAUAUGUAACGAGUAUCACCAAAUGUCACUCUUUUAGAUUUGUCUUAUUAGUUAAGGAGUUGCAACUUAUGAAGUAAAGGAUAAAUUAAAAGAGUGACCUUUGGGGAUAUUCGUGGCUCAUUACUUCUCAAAUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01054513.1
ncRNA:21   GUGCUUAUAGGGGUUUCCAGU   1
  |||||||||||||||||||||
targets:85   CACGAAUAUCCCCAAAGGUCA   105

0.0 TSA: Arachis hypogaea Unigene54555 mRNA sequence NA coding protein psRNATarget
EZ736979.1
ncRNA:21   GUGCUUAUAGGGGUUUCCAGU   1
  |||||||||||||||||||||
targets:292   CACGAAUAUCCCCAAAGGUCA   312

0.0 TSA: Arachis hypogaea CL2857Contig1.Arhy mRNA sequence NA coding protein psRNATarget

Reference

1 PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)";
Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ;
BMC Plant Biol. 10:3(2010).