ncRNA ID | novel_gma_miR6649 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:42680883-42680978 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295527 |
Length | 24 |
Mature sequence(if miRNA) | 73 - UAAAGAAUCUCACGCUAAAGGACG - 96 |
Stem-loop(if miRNA) |
--  G   -    UU       G   -- G    CGA    U  -     UG   UU UUU GUGU  GGAUUCU UGA  U AUCC   ACCU GU GUUUG  G   || ||| ||||  ||||||| |||  | ||||   |||| || |||||   AG AAA CGCA  UCUAAGA AUU  A UAGG   UGGA CA UAGAU  G GC  G   U    -C       A   UC G    ---    U  G     GA |
Stem-loop sequence | UUGUUUGUGUUUGGAUUCUGUGAUGAUCCCGAACCUUGUGUUUGUGGGAGUAGAUGACUAGGUGGAUGACUUUAAAGAAUCUCACGCUAAAGGACG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK245031.1 |
|
3.0 | Glycine max cDNA, clone: GMFL01-19-H17 | NA | coding protein | psRNATarget | |||||||||
XM_003545790.3 |
|
3.0 | PREDICTED: Glycine max calmodulin-binding protein 60 C (LOC100802994), mRNA | calmodulin-binding protein 60 C(LOC100802994) | coding protein | psRNATarget |