ncRNA ID | novel_gma_miR6637 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:27087951-27088174 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295526 |
Length | 24 |
Mature sequence(if miRNA) | 201 - ACAAAACUUGAACUGGAGGCACCU - 224 |
Stem-loop(if miRNA) |
--GC             A                   A            U       A  A     U                 -UA  CU  UAUACAUUAACUAAAAUUU     GCCUCCAGUUCAA UUUUGUCAUUUAGCAGGAG CACCACCCCACC GGCUCCU CU UUCAA UUUUUAUUUUUUUAUUU   GA  UG                   U     ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| || ||||| |||||||||||||||||   ||  ||                   C     CGGAGGUCAAGUU AAAACAGUAAAUCGUCCUC GUGGUGGGGUGG CCGAGGA GA AAGUU AAAAGUAAAAAAAUAAA   CU  UU                   U UCCA             C                   C            U       G  C     U                 UAA  --  UUAAUCUAUAUUUAUAAUA |
Stem-loop sequence | GCGCCUCCAGUUCAAAUUUUGUCAUUUAGCAGGAGACACCACCCCACCUGGCUCCUACUAUUCAAUUUUUUAUUUUUUUAUUUUAGACUUGUAUACAUUAACUAAAAUUUUCUAUAAUAUUUAUAUCUAAUUUUUCAAUAAAUAAAAAAAUGAAAAUUUGAACAGGAGGAGCCUGGUGGGGUGGUGCCUCCUGCUAAAUGACAAAACUUGAACUGGAGGCACCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003554681.3 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100818397 (LOC100818397), mRNA | uncharacterized LOC100818397(LOC100818397) | coding protein | psRNATarget |