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BaseInfo

ncRNA ID novel_gma_miR6637
Species Glycine max
Class miRNA
Genome position Chr5:27087951-27088174 [+]
Reference genome Glycine_max_v2.0
Source SRR1295526
Length 24
Mature sequence(if miRNA) 201 - ACAAAACUUGAACUGGAGGCACCU - 224
Stem-loop(if miRNA) --GC             A                   A            U       A  A     U                 -UA  CU  UAUACAUUAACUAAAAUUU
    GCCUCCAGUUCAA UUUUGUCAUUUAGCAGGAG CACCACCCCACC GGCUCCU CU UUCAA UUUUUAUUUUUUUAUUU   GA  UG                   U
    ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| || ||||| |||||||||||||||||   ||  ||                   C
    CGGAGGUCAAGUU AAAACAGUAAAUCGUCCUC GUGGUGGGGUGG CCGAGGA GA AAGUU AAAAGUAAAAAAAUAAA   CU  UU                   U
UCCA             C                   C            U       G  C     U                 UAA  --  UUAAUCUAUAUUUAUAAUA
Stem-loop sequence GCGCCUCCAGUUCAAAUUUUGUCAUUUAGCAGGAGACACCACCCCACCUGGCUCCUACUAUUCAAUUUUUUAUUUUUUUAUUUUAGACUUGUAUACAUUAACUAAAAUUUUCUAUAAUAUUUAUAUCUAAUUUUUCAAUAAAUAAAAAAAUGAAAAUUUGAACAGGAGGAGCCUGGUGGGGUGGUGCCUCCUGCUAAAUGACAAAACUUGAACUGGAGGCACCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003554681.3
ncRNA:24   UCCACGGAGGUCAAGUUCAAAACA   1
  *||||*|||*||||||||||||||
targets:173   UGGUGACUCAAGUUCAAGUUUUGU   196

2.0 PREDICTED: Glycine max uncharacterized LOC100818397 (LOC100818397), mRNA uncharacterized LOC100818397(LOC100818397) coding protein psRNATarget