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BaseInfo

ncRNA ID novel_gma_miR6636
Species Glycine max
Class miRNA
Genome position Chr5:23675269-23675319 [+]
Reference genome Glycine_max_v2.0
Source SRR1295526
Length 22
Mature sequence(if miRNA) 1 - UUUUGGAAAACCGAUGUUAACU - 22
Stem-loop(if miRNA) --                     UA
  UUUUGGAAAACCGAUGUUAAC  A
  |||||||||||||||||||||  U
  AAAACUUUUUGGCUACAAUUG  G
CA                     UA
Stem-loop sequence UUUUGGAAAACCGAUGUUAACUAAUGAUGUUAACAUCGGUUUUUCAAAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762243.1
ncRNA:22   UCAAUUGUAGCCAAAAGGUUUU   1
  |||||*||||*|||||||||||
targets:1434   AGUUAUCAUCCGUUUUCCAAAA   1455

2.5 PREDICTED: Glycine max uncharacterized LOC100798430 (LOC100798430), transcript variant X3, mRNA uncharacterized LOC100798430(LOC100798430) coding protein psRNATarget
XM_006583378.2
ncRNA:22   UCAAUUGUAGCCAAAAGGUUUU   1
  |||||*||||*|||||||||||
targets:1530   AGUUAUCAUCAGUUUUCCAAAA   1551

2.5 PREDICTED: Glycine max uncharacterized LOC100808317 (LOC100808317), mRNA uncharacterized LOC100808317(LOC100808317) coding protein psRNATarget
XM_006587425.2
ncRNA:22   UCAAUUGUAGCCAAAAGGUUUU   1
  |||||*||||*|||||||||||
targets:1431   AGUUAUCAUCCGUUUUCCAAAA   1452

2.5 PREDICTED: Glycine max uncharacterized LOC100798430 (LOC100798430), transcript variant X2, mRNA uncharacterized LOC100798430(LOC100798430) coding protein psRNATarget
XM_006587424.2
ncRNA:22   UCAAUUGUAGCCAAAAGGUUUU   1
  |||||*||||*|||||||||||
targets:1432   AGUUAUCAUCCGUUUUCCAAAA   1453

2.5 PREDICTED: Glycine max uncharacterized LOC100798430 (LOC100798430), transcript variant X1, mRNA uncharacterized LOC100798430(LOC100798430) coding protein psRNATarget