Search result

BaseInfo

ncRNA ID	novel_gma_miR6631
Species	Glycine max
Class	miRNA
Genome position	Chr10:12890272-12890446 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1292927
Length	22
Mature sequence(if miRNA)	1 - AGGAAUGUUGACCGCCACAUGU - 22
Stem-loop(if miRNA)	--            C C   A              -------         C  A         G     -----CC    ACAAUAACAAUG   AGGAAUGUUGAC G CAC UGUCACGUUCUUAU       UGACUGUCA GU UCAUGUUCU GUUGG       AAUG            C   |||||||||||| | ||| ||||||||||||||       ||||||||| || ||||||||| |||||       ||||            A   UCCUUACAACUG C GUG ACAGUGCAAGAAUA       ACUGACAGU CA AGUACAAGA UAACC       UAGG            U UU            A A   C              ACCUACU         A  C         G     UACAGCU    UACCUUCUACUU
Stem-loop sequence	AGGAAUGUUGACCGCCACAUGUCACGUUCUUAUUGACUGUCACGUAUCAUGUUCUGGUUGGCCAAUGACAAUAACAAUGCAUUUCAUCUUCCAUGGAUUCGACAUCCAAUGAGAACAUGACACAUGACAGUCAUCAUCCAAUAAGAACGUGACACGUGACAGUCAACAUUCCUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003548226.3	ncRNA:22   UGUACACCGCCAGUUGUAAGGA   1   *|*|||||=|||||||||*||| targets:1175   UCCUGUGGUGGUCAACAUCCCU   1196 Target Full Sequence	2.5	PREDICTED: Glycine max putative UPF0481 protein At3g02645 (LOC100803197), mRNA	putative UPF0481 protein At3g02645(LOC100803197)	coding protein	psRNATarget