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BaseInfo

ncRNA ID novel_gma_miR6619
Species Glycine max
Class miRNA
Genome position Chr10:49600311-49600424 [+]
Reference genome Glycine_max_v2.0
Source SRR1295526
Length 24
Mature sequence(if miRNA) 1 - AGUUGACGUACGUACGGAUUGGCA - 24
Stem-loop(if miRNA) --          C   CG                -AA       A     A      A
  AGUUGACGUA GUA  GAUUGGCAAUCCGUAU   UCAUACA AUUGU UGGUUC U
  |||||||||| |||  ||||||||||||||||   ||||||| ||||| ||||||
  UCAACUGCAU CAU  CUAACUGUUAGGCAUA   AGUGUGU UAACG AUUAGG A
UU          A   AU                CUA       A     -      C
Stem-loop sequence AGUUGACGUACGUACGGAUUGGCAAUCCGUAUAAUCAUACAAAUUGUAUGGUUCAUACGGAUUAGCAAUAUGUGUGAAUCAUACGGAUUGUCAAUCUAUACAUACGUCAACUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544319.3
ncRNA:24   ACGG-----------UUAGGCAUGCAUGCAGUUGA   1
  ||||-----------||*||*|||||||||||||*
targets:184   UGCCCUAAACAUUCAAAACCCUACGUACGUCAACA   218

3.0 PREDICTED: Glycine max cysteine-rich repeat secretory protein 60-like (LOC100817574), mRNA cysteine-rich repeat secretory protein 60-like(LOC100817574) coding protein psRNATarget
XM_006575421.2
ncRNA:24   ACGG-----------UUAGGCAUGCAUGCAGUUGA   1
  ||||-----------||*||*|||||||||||||*
targets:145   UGCCCUAGACACUCAAAACCCUACGUACGUCAACA   179

3.0 PREDICTED: Glycine max cysteine-rich repeat secretory protein 60-like (LOC100800560), mRNA cysteine-rich repeat secretory protein 60-like(LOC100800560) coding protein psRNATarget