ncRNA ID | novel_gma_miR6611 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:32170624-32170787 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295526 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGAGAAGGUAGACCAGAUGAGG - 24 |
Stem-loop(if miRNA) |
--      A       C              U    AACAAAC      A                C   AAUG   AUAA GA   AAGGAG AGGUAGA CAGAUGAGGAUGAA ACAU       CCUGUU AUGAUUACAUUGGAGG AAC    AAG    U  C   |||||| ||||||| |||||||||||||| ||||       |||||| |||||||||||||||| |||    |||    |   UUCCUC UCCAUCU GUUUACUCCUACUU UGUA       GGAUAA UACUAAUGUAACCUCC UUG    UUC    A  U GG      C       U              C    CUAUCUA      C                U   ---A   -GAG AG |
Stem-loop sequence | AAGGAGAAGGUAGACCAGAUGAGGAUGAAUACAUAACAAACCCUGUUAAUGAUUACAUUGGAGGCAACAAUGAAGAUAAUGACUGAAGAGCUUAGUUUCCUCCAAUGUAAUCAUCAAUAGGAUCUAUCAUGUCUUCAUCCUCAUUUGUUCUACCUCCUCCUUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003545091.3 |
|
2.0 | PREDICTED: Glycine max probable galacturonosyltransferase 15 (LOC100802290), mRNA | probable galacturonosyltransferase 15(LOC100802290) | coding protein | psRNATarget |