Search result

BaseInfo

ncRNA ID novel_gma_miR6595
Species Glycine max
Class miRNA
Genome position Chr8:18843771-18843856 [+]
Reference genome Glycine_max_v2.0
Source SRR1295526
Length 24
Mature sequence(if miRNA) 1 - UACAACAUCGGUUUUCAAAUAAUC - 24
Stem-loop(if miRNA) --                               AAAUC      A
  UACAACAUCGGUUUUCAAAUAAUCGAUGUUA     ACACUA A
  |||||||||||||||||||||||||||||||     |||||| U
  AUGUUGUAGUUAAAAGUUUAUUAGCUACAAU     UGUGAU U
GA                               -----      G
Stem-loop sequence UACAACAUCGGUUUUCAAAUAAUCGAUGUUAAAAUCACACUAAAUUGUAGUGUUAACAUCGAUUAUUUGAAAAUUGAUGUUGUAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003537739.3
ncRNA:24   CUAAUAAACUUUUGGCUACAACAU   1
  *||*|*||||||=|||||||||||
targets:1548   UAUGAAUUGAAAGCCGAUGUUGUA   1571

2.5 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09820 (LOC100791270), mRNA pentatricopeptide repeat-containing protein At1g09820(LOC100791270) coding protein psRNATarget
XM_014764817.1
ncRNA:23   UAAUAAACUUUUGGCUACAACAU   1
  =||-|||||||||||||||*||=
targets:1   GUU-UUUGAAAACCGAUGUCGUG   22

2.5 PREDICTED: Glycine max uncharacterized LOC102659453 (LOC102659453), mRNA uncharacterized LOC102659453(LOC102659453) coding protein psRNATarget