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BaseInfo

ncRNA ID novel_gma_miR6584
Species Glycine max
Class miRNA
Genome position Chr18:15216870-15217046 [-]
Reference genome Glycine_max_v2.0
Source SRR1295525;SRR1451607
Length 24
Mature sequence(if miRNA) 1 - UUGGUGCUGAUUCUUCUAGUGAGA - 24
Stem-loop(if miRNA) --GA    C  U                     C      A                     C     A          -         
    ACUA AA GAUCAGCACCAAUCUGUGCUU UUCCUC UCUACCAGCUCAAUAUCUUUC UUUCA CUUUUGUUUU GUAAAUUACA
    |||| || ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||G
    UGAU UU UUAGUCGUGGUUAGGCACGGA AAGGAG AGAUGGUCGAGUUAUAGAAAG AAAGU GGAAACGAAA CAUUUGAUGU
AGAG    C  C                     C      G                     C     -          A         
Stem-loop sequence GAACUACAAUGAUCAGCACCAAUCUGUGCUUCUUCCUCAUCUACCAGCUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUACAGUGUAGUUUACAAAAGCAAAGGUGAAACGAAAGAUAUUGAGCUGGUAGAGGAGGAACAGGCACGGAUUGGUGCUGAUUCUUCUAGUGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766177.1
ncRNA:24   AGAGUGAUCUUCUUAGUCGUGGUU   1
  ****||*|||||||||||||||||
targets:415   AAAAACAAGAAGAAUCAGCACCAA   438

1.0 PREDICTED: Glycine max uncharacterized LOC106795597 (LOC106795597), mRNA uncharacterized LOC106795597(LOC106795597) coding protein psRNATarget
XM_014773249.1
ncRNA:24   AGAGUGAUCUUCUUAGUCGUGGUU   1
  ****||*|||||||||||||||||
targets:1529   AAAAACAAGAAGAAUCAGCACCAA   1552

1.0 PREDICTED: Glycine max uncharacterized LOC100788241 (LOC100788241), mRNA uncharacterized LOC100788241(LOC100788241) coding protein psRNATarget
XM_003520454.3
ncRNA:24   AGAGUGAUCUUCUUAGUCGUGGUU   1
  ****||*|||||||||||||||||
targets:3340   AAAAACAAGAAGAAUCAGCACCAA   3363

1.0 PREDICTED: Glycine max uncharacterized LOC100804484 (LOC100804484), mRNA uncharacterized LOC100804484(LOC100804484) coding protein psRNATarget