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BaseInfo

ncRNA ID novel_gma_miR6583
Species Glycine max
Class miRNA
Genome position Chr18:40519092-40519167 [-]
Reference genome Glycine_max_v2.0
Source SRR1295525
Length 24
Mature sequence(if miRNA) 1 - CCGUCUUUGAAUGUUGUGUGUGCU - 24
Stem-loop(if miRNA) --CUG  U                             U
     AU CGACAUUCAAAGACGGUUAUUGGCUAAUA G
     || |||||||||||||||||||||||||||||
     UG GUUGUAAGUUUCUGCCAAUAAUCGGUUAU G
UCGUG  U                             U
Stem-loop sequence CUGAUUCGACAUUCAAAGACGGUUAUUGGCUAAUAUGGUUAUUGGCUAAUAACCGUCUUUGAAUGUUGUGUGUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:24   UCGUGUGUGUUGUAAGUUUCUGCC   1
  ||*|*|||=|||||||||||||||
targets:1478   AGAAGACAUAACAUUCAAAGACGG   1501

1.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UCGUGUGUGUUGUAAGUUUCUGCC   1
  ||*|*|*=||||||||||||||||
targets:1533   AGAAGAAGCAACAUUCAAAGACGG   1556

2.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UCGUGUGUGUUGUAAGUUUCUGCC   1
  ||*|*|||=|||||||||||=|||
targets:1588   AGAAGACAUAACAUUCAAAGGCGG   1611

2.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget