ncRNA ID | novel_gma_miR6579 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:35397957-35398144 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295525;SRR1451609;SRR1451616;SRR1451619 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UACCAGAGGCUGUAAUUGAUUACC - 24 |
Stem-loop(if miRNA) |
-UAC    -G    -           -  ------------AA     AAAU       ACA           ---        -A G        --AA     A     CAGA  GCUG UAAUUGAUUAC CA              AGCCA    UGAUUUU   AGUUUGAAUUU   AAAUUUUA  A UUGUAAUC    UUACU C     ||||  |||| ||||||||||| ||              |||||    |||||||   |||||||||||   ||||||||  | ||||||||    ||||| C     GUCU  UGAC AUUAGCUAAUG GU              UCGGU    ACUGAAA   UCAAACUUAAA   UUUAAAGU  U AGCAUUAG    AGUGG U UAAU    AG    C           U  CAAUAAAUUACUCC     ----       -AA           GUU        AA G        CUAA     U |
Stem-loop sequence | UACCAGAGGCUGUAAUUGAUUACCAAAAGCCAAAAUUGAUUUUACAAGUUUGAAUUUAAAUUUUAAAGUUGUAAUCAAUUACUACCUUGGUGAAAUCGAUUACGAGUAAUGAAAUUUUUGAAAUUCAAACUAAAAAGUCAUGGCUCCUCAUUAAAUAACUGUGUAAUCGAUUACCAGUGAUCUGUAAU |