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BaseInfo

ncRNA ID novel_gma_miR6568
Species Glycine max
Class miRNA
Genome position Chr15:21395467-21395535 [+]
Reference genome Glycine_max_v2.0
Source SRR1295525
Length 24
Mature sequence(if miRNA) 1 - AUCAAGUUGAUCCAUAUGAGUCAU - 24
Stem-loop(if miRNA) --                   G           A
  AUCAAGUUGAUCCAUAUGA UCAUACGGAUC A
  ||||||||||||||||||| ||||||||||| C
  UAGUUCAACUAGGUAUACU AGUAUGCCUGG U
CC                   G           A
Stem-loop sequence AUCAAGUUGAUCCAUAUGAGUCAUACGGAUCAACUAGGUCCGUAUGAGUCAUAUGGAUCAACUUGAUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573467.2
ncRNA:24   UACUGAGUAUACCUAGUUGAACUA   1
  =|*|*||||||||||||||||*||
targets:281   GUAAAUCAUAUGGAUCAACUUAAU   304

1.5 PREDICTED: Glycine max uncharacterized LOC102666981 (LOC102666981), mRNA uncharacterized LOC102666981(LOC102666981) coding protein psRNATarget
XM_003547498.3
ncRNA:24   UACUGAGUAUACCUAGUUGAACUA   1
  *|||**||||*|||||||||||||
targets:406   UUGAAGCAUACGGAUCAACUUGAU   429

2.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:24   UACUGAGUAUACCUAGUUGAACUA   1
  *|||**||||*|||||||||||||
targets:1001   UUGAAGCAUACGGAUCAACUUGAU   1024

2.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014770919.1
ncRNA:24   UACUGAGUAUACCUAGUUGAACUA   1
  |*|*=||*|=||||||||||||||
targets:2148   AAGUUUCUUGUGGAUCAACUUGAU   2171

2.0 PREDICTED: Glycine max uncharacterized LOC100800748 (LOC100800748), transcript variant X3, mRNA uncharacterized LOC100800748(LOC100800748) coding protein psRNATarget
XM_006602969.2
ncRNA:24   UACUGAGUAUACCUAGUUGAACUA   1
  |*|*=||*|=||||||||||||||
targets:2147   AAGUUUCUUGUGGAUCAACUUGAU   2170

2.0 PREDICTED: Glycine max uncharacterized LOC100800748 (LOC100800748), transcript variant X2, mRNA uncharacterized LOC100800748(LOC100800748) coding protein psRNATarget
XM_014770918.1
ncRNA:24   UACUGAGUAUACCUAGUUGAACUA   1
  |*|*=||*|=||||||||||||||
targets:2147   AAGUUUCUUGUGGAUCAACUUGAU   2170

2.0 PREDICTED: Glycine max uncharacterized LOC100800748 (LOC100800748), transcript variant X1, mRNA uncharacterized LOC100800748(LOC100800748) coding protein psRNATarget