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BaseInfo

ncRNA ID	novel_gma_miR6553
Species	Glycine max
Class	miRNA
Genome position	Chr13:58996-59172 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1295525;SRR1451607
Length	24
Mature sequence(if miRNA)	154 - UUGGUGCUGAUUCUUCUAGUGAGA - 177
Stem-loop(if miRNA)	--G        C                     C      G       G             C     A          -        G    CACUAGAA GAUCAGCACCAAUCUGUGCUU UUCCUC UCUACUA CUCAAUAUCUUUC UUUCA CUUUUGUUUU GUAAAUUA A    |||||||| ||||||||||||||||||||| |||||| ||||||| ||||||||||||| ||||| |||||||||| |||||||| G    GUGAUCUU UUAGUCGUGGUUAGGCACGGA AAGGAG AGAUGGU GAGUUAUAGAAAG AAAGU GGAAACGAAA CAUUUGAU U AGA        C                     C      G       A             C     -          A        G
Stem-loop sequence	GCACUAGAACGAUCAGCACCAAUCUGUGCUUCUUCCUCGUCUACUAGCUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUAGAGUGUAGUUUACAAAAGCAAAGGUGAAACGAAAGAUAUUGAGAUGGUAGAGGAGGAACAGGCACGGAUUGGUGCUGAUUCUUCUAGUGAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014766177.1	ncRNA:24   AGAGUGAUCUUCUUAGUCGUGGUU   1   ****||*||||||||||||||||| targets:415   AAAAACAAGAAGAAUCAGCACCAA   438 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC106795597 (LOC106795597), mRNA	uncharacterized LOC106795597(LOC106795597)	coding protein	psRNATarget
XM_014773249.1	ncRNA:24   AGAGUGAUCUUCUUAGUCGUGGUU   1   ****||*||||||||||||||||| targets:1529   AAAAACAAGAAGAAUCAGCACCAA   1552 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100788241 (LOC100788241), mRNA	uncharacterized LOC100788241(LOC100788241)	coding protein	psRNATarget
XM_003520454.3	ncRNA:24   AGAGUGAUCUUCUUAGUCGUGGUU   1   ****||*||||||||||||||||| targets:3340   AAAAACAAGAAGAAUCAGCACCAA   3363 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100804484 (LOC100804484), mRNA	uncharacterized LOC100804484(LOC100804484)	coding protein	psRNATarget