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BaseInfo

ncRNA ID	novel_gma_miR6552
Species	Glycine max
Class	miRNA
Genome position	Chr12:5951140-5951243 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1295525
Length	24
Mature sequence(if miRNA)	1 - UUUCCUUAUGACCGUCUUAGAACC - 24
Stem-loop(if miRNA)	--    CU  U             CCC       -AAAUAACAAUUU    GA   UUUC  UA GACCGUCUUAGAA   GCGACGU             UAAU  C   ||||  || |||||||||||||   |||||||             ||||  A   AAAG  AU UUGGCGGAAUCUU   UGUUGCA             AUUA  U CC    AC  C             --U       CCACCAUAAAAAC    AU
Stem-loop sequence	UUUCCUUAUGACCGUCUUAGAACCCGCGACGUAAAUAACAAUUUUAAUGACAUUAAUUACAAAAAUACCACCACGUUGUUUUCUAAGGCGGUUCUACAGAAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014766623.1	ncRNA:24   CC--AAGAUUCUGCCAGUAUUCCUUU   1   ||--|||||||||||||=|||||||* targets:3161   GGCAUUCUAAGACGGUCGUAAGGAAC   3186 Target Full Sequence	2.5	PREDICTED: Glycine max putative multidrug resistance protein (LOC106795741), mRNA	putative multidrug resistance protein(LOC106795741)	coding protein	psRNATarget
XM_006595284.2	ncRNA:24   CC--AAGAUUCUGCCAGUAUUCCUUU   1   ||--|||||||||||||=|||||||* targets:3036   GGCAUUCUAAGACGGUCGUAAGGAAC   3061 Target Full Sequence	2.5	PREDICTED: Glycine max putative multidrug resistance protein (LOC102669282), mRNA	putative multidrug resistance protein(LOC102669282)	coding protein	psRNATarget
XM_014778226.1	ncRNA:24   CCAA----GAUUCUGCCAGUAUUCCUUU   1   *|||----=|=|||||*||||||||||| targets:308   CGUUGGAGUUGAGACGCUCAUAAGGAAA   335 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100808829 (LOC100808829), transcript variant X1, mRNA	uncharacterized LOC100808829(LOC100808829)	coding protein	psRNATarget
XM_003528596.3	ncRNA:24   CCAA----GAUUCUGCCAGUAUUCCUUU   1   *|||----=|=|||||*||||||||||| targets:341   CGUUGGAGUUGAGACGCUCAUAAGGAAA   368 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100808829 (LOC100808829), transcript variant X2, mRNA	uncharacterized LOC100808829(LOC100808829)	coding protein	psRNATarget