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BaseInfo

ncRNA ID	novel_gma_miR6540
Species	Glycine max
Class	miRNA
Genome position	Chr1:11974845-11974925 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1295525
Length	24
Mature sequence(if miRNA)	1 - UUACAACACACAUUCUAAGACGGU - 24
Stem-loop(if miRNA)	--              AC CG    C    UUGUAA        CGUCUUAGAAUGUG  G  GUGG AAAC      UUAGGA   ||||||||||||||  |  |||| ||||      |||||U   GCAGAAUCUUACAC  C  CAUU UUUG      AGUCCA UG              -A AA    U    -UUAAA
Stem-loop sequence	CGUCUUAGAAUGUGACGCGGUGGCAAACUUGUAAUUAGGAUACCUGAAAAUUGUUUUUUACAACACACAUUCUAAGACGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003540308.3	ncRNA:24   UGGCAGAAUCUUACACACAACAUU   1   |=**||*||*|||||||||||||| targets:3904   AUGUUCAUAUAAUGUGUGUUGUAA   3927 Target Full Sequence	2.0	PREDICTED: Glycine max protein STABILIZED1-like (LOC100779042), mRNA	protein STABILIZED1-like(LOC100779042)	coding protein	psRNATarget
NM_001255444.2	ncRNA:24   UGGCAGAAUCUUACACACAACAUU   1   **=|||||||||||||||||||** targets:805   UGUGUCUUAGAAUGUGUGUUGUCC   828 Target Full Sequence	2.5	Glycine max ganglioside-induced differentiation-associated protein 2-like (LOC100810365), mRNA	ganglioside-induced differentiation-associated protein 2-like(LOC100810365)	coding protein	psRNATarget
BT093250.1	ncRNA:24   UGGCAGAAUCUUACACACAACAUU   1   **=|||||||||||||||||||** targets:807   UGUGUCUUAGAAUGUGUGUUGUCC   830 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-14A21 unknown mRNA	NA	coding protein	psRNATarget
XM_006582441.2	ncRNA:24   UGGCAGAAUCUUACACACAACAUU   1   |==|*||*||*||||||||||||= targets:2216   AUUGGCUCAGUAUGUGUGUUGUAG   2239 Target Full Sequence	3.0	PREDICTED: Glycine max serine/threonine-protein kinase CDG1-like (LOC100800663), mRNA	serine/threonine-protein kinase CDG1-like(LOC100800663)	coding protein	psRNATarget