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BaseInfo

ncRNA ID	novel_gma_miR6538
Species	Glycine max
Class	miRNA
Genome position	Chr1:23968813-23968886 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1295525
Length	24
Mature sequence(if miRNA)	1 - AGAGGCUACUCUGAAUUAUUGGGG - 24
Stem-loop(if miRNA)	--        G     AA    -A AA  A       U   CUAAUGAU UUAGA  AGUU  U  CA GUUCACU A   |||||||| |||||  ||||  |  || |||||||   GGUUAUUA AGUCU  UCGG  A  GU UAGGUGA U GG        -     CA    AG GG  A       U
Stem-loop sequence	CUAAUGAUGUUAGAAAAGUUAUAACAAGUUCACUUAUUAGUGGAUAUGGGAGAGGCUACUCUGAAUUAUUGGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003550460.3	ncRNA:24   GGGGUUAUUAAGUCUCAUCGGAGA   1   *|=*=||=||||||||*||||||| targets:1011   ACUGGAUGAUUCAGAGAAGCCUCU   1034 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100777897 (LOC100777897), mRNA	uncharacterized LOC100777897(LOC100777897)	coding protein	psRNATarget
XM_003552185.3	ncRNA:24   GGGGUUAUUA-AGUCUCAUCGGAGA   1   *=*|*|||=|-|||||||||||||| targets:301   AUACUAUAGUAUCAGAGUAGCCUCU   325 Target Full Sequence	3.0	PREDICTED: Glycine max auxin transporter-like protein 2 (LOC100810532), transcript variant X3, mRNA	auxin transporter-like protein 2(LOC100810532)	coding protein	psRNATarget
XM_014771162.1	ncRNA:24   GGGGUUAUUA-AGUCUCAUCGGAGA   1   *=*|*|||=|-|||||||||||||| targets:301   AUACUAUAGUAUCAGAGUAGCCUCU   325 Target Full Sequence	3.0	PREDICTED: Glycine max auxin transporter-like protein 2 (LOC100810532), transcript variant X4, mRNA	auxin transporter-like protein 2(LOC100810532)	coding protein	psRNATarget
XM_006602583.2	ncRNA:24   GGGGUUAUUA-AGUCUCAUCGGAGA   1   *=*|*|||=|-|||||||||||||| targets:301   AUACUAUAGUAUCAGAGUAGCCUCU   325 Target Full Sequence	3.0	PREDICTED: Glycine max auxin transporter-like protein 2 (LOC100810532), transcript variant X1, mRNA	auxin transporter-like protein 2(LOC100810532)	coding protein	psRNATarget
XM_006602584.2	ncRNA:24   GGGGUUAUUA-AGUCUCAUCGGAGA   1   *=*|*|||=|-|||||||||||||| targets:301   AUACUAUAGUAUCAGAGUAGCCUCU   325 Target Full Sequence	3.0	PREDICTED: Glycine max auxin transporter-like protein 2 (LOC100810532), transcript variant X2, mRNA	auxin transporter-like protein 2(LOC100810532)	coding protein	psRNATarget