ncRNA ID | novel_gma_miR6521 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:28014908-28015019 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295525 |
Length | 24 |
Mature sequence(if miRNA) | 89 - AGCAUUCAAAGACGGUUAUUAGCU - 112 |
Stem-loop(if miRNA) |
-U   A   C            CAACGCAGACAUAACAUUCAAAGGCAGUUAUUAU   UAA AAC GUCUUUGAAUGU                                  C   ||| ||| ||||||||||||                                  U   GAU UAU UGGCAGAAACUU                                  A UC   -   -            ACGAUACAGACGCAACUGUAAGUUUCUGCCAAUA |
Stem-loop sequence | UUAAAAACCGUCUUUGAAUGUCAACGCAGACAUAACAUUCAAAGGCAGUUAUUAUCUAAUAACCGUCUUUGAAUGUCAACGCAGACAUAGCAUUCAAAGACGGUUAUUAGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775607.1 |
|
2.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_006601444.1 |
|
2.5 | PREDICTED: Glycine max splicing factor 3B subunit 2-like (LOC102663030), mRNA | splicing factor 3B subunit 2-like(LOC102663030) | coding protein | psRNATarget | |||||||||
BT094602.1 |
|
3.0 | Soybean clone JCVI-FLGm-14B22 unknown mRNA | NA | coding protein | psRNATarget |