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BaseInfo

ncRNA ID novel_gma_miR6511
Species Glycine max
Class miRNA
Genome position Chr5:32311507-32311591 [+]
Reference genome Glycine_max_v2.0
Source SRR1295525
Length 24
Mature sequence(if miRNA) 62 - UUUUUGAAAUUUUGUGUUUGGAUA - 85
Stem-loop(if miRNA) --  UG   GAA           UU ---U        UAAAUA
  UU  GAU   AGAAUUUUAAA  U    GAGAAUUU      U
  ||  |||   |||||||||||  |    ||||||||      U
  AG  UUG   UUUUAAAGUUU  A    UUCUUAAA      U
AU  GU   -UG           UU UUUU        UCUAAU
Stem-loop sequence UUUGGAUGAAAGAAUUUUAAAUUUUGAGAAUUUUAAAUAUUUUAAUCUAAAUUCUUUUUUAUUUUUGAAAUUUUGUGUUUGGAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014772368.1
ncRNA:24   AUAGGUUUGUGUUUUAAAGUUUUU   1
  ||||-|||=|||||||||=|||||
targets:791   UAUC-AAAUACAAAAUUUUAAAAA   813

2.5 PREDICTED: Glycine max histone-lysine N-methyltransferase SUVR4-like (LOC100819479), mRNA histone-lysine N-methyltransferase SUVR4-like(LOC100819479) coding protein psRNATarget
XM_003554975.3
ncRNA:24   AUAG-GUUUGUGUUUUAAAGUUUUU   1
  *|||-|*|=|||||||||||||||*
targets:331   CAUCACCAGCACAAAAUUUCAAAAC   355

3.0 PREDICTED: Glycine max alkane hydroxylase MAH1-like (LOC100785815), mRNA alkane hydroxylase MAH1-like(LOC100785815) coding protein psRNATarget