ncRNA ID | novel_gma_miR6511 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:32311507-32311591 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295525 |
Length | 24 |
Mature sequence(if miRNA) | 62 - UUUUUGAAAUUUUGUGUUUGGAUA - 85 |
Stem-loop(if miRNA) |
--  UG   GAA           UU ---U        UAAAUA   UU  GAU   AGAAUUUUAAA  U    GAGAAUUU      U   ||  |||   |||||||||||  |    ||||||||      U   AG  UUG   UUUUAAAGUUU  A    UUCUUAAA      U AU  GU   -UG           UU UUUU        UCUAAU |
Stem-loop sequence | UUUGGAUGAAAGAAUUUUAAAUUUUGAGAAUUUUAAAUAUUUUAAUCUAAAUUCUUUUUUAUUUUUGAAAUUUUGUGUUUGGAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014772368.1 |
|
2.5 | PREDICTED: Glycine max histone-lysine N-methyltransferase SUVR4-like (LOC100819479), mRNA | histone-lysine N-methyltransferase SUVR4-like(LOC100819479) | coding protein | psRNATarget | |||||||||
XM_003554975.3 |
|
3.0 | PREDICTED: Glycine max alkane hydroxylase MAH1-like (LOC100785815), mRNA | alkane hydroxylase MAH1-like(LOC100785815) | coding protein | psRNATarget |