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BaseInfo

ncRNA ID novel_gma_miR6510
Species Glycine max
Class miRNA
Genome position Chr5:4828599-4828672 [+]
Reference genome Glycine_max_v2.0
Source SRR1295525
Length 24
Mature sequence(if miRNA) 1 - ACCAAACGUUUUCCGGAAGAACCC - 24
Stem-loop(if miRNA) --A     C    U         C   GC       A
   CCAAA GUUU CCGGAAGAA CCU  UUCCGGA A
   ||||| |||| ||||||||| |||  ||||||| C
   GGUUU CAAA GGCCUUCUU GGA  AAGGCCU U
UAG     U    -         U   AA       U
Stem-loop sequence ACCAAACGUUUUCCGGAAGAACCCUGCUUCCGGAAACUUUCCGGAAAAAGGUUUCUUCCGGAAACUUUUGGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003518867.3
ncRNA:24   CCCAAGAAGGCCUUUUGCAAACCA   1
  ||***||||*||||||=|||||||
targets:1274   GGAAGCUUCGGGAAAAUGUUUGGU   1297

2.5 PREDICTED: Glycine max uncharacterized LOC100791409 (LOC100791409), mRNA uncharacterized LOC100791409(LOC100791409) coding protein psRNATarget