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BaseInfo

ncRNA ID novel_gma_miR6507
Species Glycine max
Class miRNA
Genome position Chr5:5720-5774 [+]
Reference genome Glycine_max_v2.0
Source SRR1295525;SRR1451616
Length 24
Mature sequence(if miRNA) 1 - AAGGAACCAGUAUAUAUGAUGAGC - 24
Stem-loop(if miRNA) --     AC A    A  UG    G AA
  AAGGA  C GUAU UA  AUGA C  U
  |||||  | |||| ||  |||| |  C
  UUCCU  G CAUA AU  UGCU G  A
AC     GA A    -  GU    - AA
Stem-loop sequence AAGGAACCAGUAUAUAUGAUGAGCAAUCAAAGUCGUUGUAAUACAGAGUCCUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006603015.2
ncRNA:24   CGAGUAGUAUAUAUGACCAAGGAA   1
  ||||||||||||||||||||||||
targets:649   GCUCAUCAUAUAUACUGGUUCCUU   672

0.0 PREDICTED: Glycine max histone-lysine N-methyltransferase ASHR3-like (LOC102663920), transcript variant X1, mRNA histone-lysine N-methyltransferase ASHR3-like(LOC102663920) coding protein psRNATarget
AK286449.1
ncRNA:24   CGAGUAGUAUAUAUGACCAAGGAA   1
  *||=*|||*||||*||||||||||
targets:2067   UCUUCUCAAAUAUUCUGGUUCCUU   2090

2.5 Glycine max cDNA, clone: GMFL01-28-K20 NA coding protein psRNATarget
AK243833.1
ncRNA:24   CGAGUAGUAUAUAUGACCAAGGAA   1
  *||=*|||*||||*||||||||||
targets:2068   UCUUCUCAAAUAUUCUGGUUCCUU   2091

2.5 Glycine max cDNA, clone: GMFL01-01-G02 NA coding protein psRNATarget
XM_003536765.3
ncRNA:24   CGAGUAGUAUAUAUGACCAAGGAA   1
  *||=*|||*||||*||||||||||
targets:2122   UCUUCUCAAAUAUUCUGGUUCCUU   2145

2.5 PREDICTED: Glycine max importin beta-like SAD2 (LOC100795105), mRNA importin beta-like SAD2(LOC100795105) coding protein psRNATarget