Search result

BaseInfo

ncRNA ID novel_gma_miR6499
Species Glycine max
Class miRNA
Genome position Chr3:28299905-28299956 [-]
Reference genome Glycine_max_v2.0
Source SRR1295525;SRR1451605;SRR1451620
Length 24
Mature sequence(if miRNA) 29 - UCUUAAAUGCAUACGUCGGGCGCC - 52
Stem-loop(if miRNA) --     A     U    -    -C  
  UCUUA AUGCA ACGU CGGG  GCC
  ||||| ||||| |||| ||||  ||A
  AGAAU UAUGU UGCA GCCC  CGU
GA     C     -    A    AU  
Stem-loop sequence UCUUAAAUGCAUACGUCGGGCGCCAUGCUACCCGAACGUUGUAUCUAAGAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003523641.3
ncRNA:24   CCGCGGGCUGCAUACGUAAAUUCU   1
  **=*|||*||*|||||||||||||
targets:2617   AUUUCCCAACUUAUGCAUUUAAGA   2640

2.0 PREDICTED: Glycine max G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC100782258), mRNA G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5(LOC100782258) coding protein psRNATarget