ncRNA ID | novel_gma_miR6498 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:38286509-38286629 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295525 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGAGAUACAUUCUAAGACGGUC - 24 |
Stem-loop(if miRNA) |
--  A  G          AA             -GU    ACCC                AU   CC UC UAGAAUGUAU  CAUUCUAAGACGG   UCCU    AGGACCGUCUUAGAAU  A   || || ||||||||||  |||||||||||||   ||||    ||||||||||||||||  C   GG AG AUCUUACAUA  GUAAGAUUCUGCU   AGGA    UUCUGGCAGAAUCUUA  C CU  C  A          GA             AAC    ---A                CA |
Stem-loop sequence | CCAUCGUAGAAUGUAUAACAUUCUAAGACGGGUUCCUACCCAGGACCGUCUUAGAAUAUACCACAUUCUAAGACGGUCUUAAGGACAAUCGUCUUAGAAUGAGAUACAUUCUAAGACGGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006592577.2 |
|
2.5 | PREDICTED: Glycine max 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like (LOC100791297), transcript variant X6, mRNA | 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like(LOC100791297) | coding protein | psRNATarget |