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BaseInfo

ncRNA ID	novel_gma_miR6493
Species	Glycine max
Class	miRNA
Genome position	Chr20:24719242-24719293 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1295525
Length	24
Mature sequence(if miRNA)	1 - AUCAACUUGAUCCGUAAACUGCUC - 24
Stem-loop(if miRNA)	--           C        GCUC   AUCAACUUGAU CGUAAACU    G   ||||||||||| ||||||||   UAGUUGAACUA GUAUUUGA    A CC           A        AAGA
Stem-loop sequence	AUCAACUUGAUCCGUAAACUGCUCGAAGAAAGUUUAUGAAUCAAGUUGAUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003547498.3	ncRNA:24   CUCGUCAAAUGCCUAGUUCAACUA   1   *||*|||||=|||||||||||||* targets:205   AAGAAGUUUGCGGAUCAAGUUGAC   228 Target Full Sequence	2.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:24   CUCGUCAAAUGCCUAGUUCAACUA   1   *||*|||||=|||||||||||||* targets:800   AAGAAGUUUGCGGAUCAAGUUGAC   823 Target Full Sequence	2.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:24   CUCGUCAAAUGCCUAGUUCAACUA   1   *|****||||||||||||*||||| targets:504   AAAAUCUUUACGGAUCAACUUGAU   527 Target Full Sequence	2.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_006600975.2	ncRNA:24   CUCGUCAA--AUGCCUAGUUCAACUA   1   ****=|||--|||||||||||||||| targets:1178   ACAAGGUUGAUACGGAUCAAGUUGAU   1203 Target Full Sequence	2.5	PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA	basic leucine zipper 9-like(LOC100776831)	coding protein	psRNATarget
XM_014779355.1	ncRNA:24   CUCGUCAAAUGCCUAGUUCAACUA   1   ||--||||||*|||||||*||||| targets:1448   GA--AGUUUAGGGAUCAAAUUGAU   1469 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100808678 (LOC100808678), transcript variant X4, mRNA	uncharacterized LOC100808678(LOC100808678)	coding protein	psRNATarget
XM_014779354.1	ncRNA:24   CUCGUCAAAUGCCUAGUUCAACUA   1   ||--||||||*|||||||*||||| targets:1487   GA--AGUUUAGGGAUCAAAUUGAU   1508 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100808678 (LOC100808678), transcript variant X3, mRNA	uncharacterized LOC100808678(LOC100808678)	coding protein	psRNATarget
XM_006585963.2	ncRNA:24   CUCGUCAAAUGCCUAGUUCAACUA   1   ||--||||||*|||||||*||||| targets:1610   GA--AGUUUAGGGAUCAAAUUGAU   1631 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100808678 (LOC100808678), transcript variant X2, mRNA	uncharacterized LOC100808678(LOC100808678)	coding protein	psRNATarget
XM_006585962.2	ncRNA:24   CUCGUCAAAUGCCUAGUUCAACUA   1   ||--||||||*|||||||*||||| targets:1651   GA--AGUUUAGGGAUCAAAUUGAU   1672 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100808678 (LOC100808678), transcript variant X1, mRNA	uncharacterized LOC100808678(LOC100808678)	coding protein	psRNATarget