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BaseInfo

ncRNA ID novel_gma_miR6489
Species Glycine max
Class miRNA
Genome position Chr19:4089313-4089365 [+]
Reference genome Glycine_max_v2.0
Source SRR1295525
Length 24
Mature sequence(if miRNA) 1 - AACUGUGAACUUGAGAAUUGGCCA - 24
Stem-loop(if miRNA) --       A  -UUGA   UU   CA
  AACUGUG AC     GAA  GGC  A
  ||||||| ||     |||  |||  U
  UUGACGU UG     UUU  UCG  G
UA       A  UAAGG   -U   AA
Stem-loop sequence AACUGUGAACUUGAGAAUUGGCCAAUGAAGCUUUUUGGAAUGUAUGCAGUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003552600.2
ncRNA:24   ACCGGUUAAGAGUUCAAGUGUCAA   1
  |**==|||||||||||||*|||||
targets:3437   UUUUUAAUUCUCAAGUUCUCAGUU   3460

1.5 PREDICTED: Glycine max importin beta-like SAD2 (LOC100809471), transcript variant X1, mRNA importin beta-like SAD2(LOC100809471) coding protein psRNATarget