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BaseInfo

ncRNA ID novel_gma_miR6483
Species Glycine max
Class miRNA
Genome position Chr1:14972137-14972204 [-]
Reference genome Glycine_max_v2.0
Source SRR1295524
Length 24
Mature sequence(if miRNA) 45 - AACCUGUAUCAAACGAUCCGCUCC - 68
Stem-loop(if miRNA) --AA          AC          UACUC   U
    CCUGUAUCAA  GAUCCGCUCC     AGG U
    ||||||||||  ||||||||||     |||
    GGACAUAGUU  CUAGGCGGGG     UCC A
UGUC          CA          --CAU   A
Stem-loop sequence AACCUGUAUCAAACGAUCCGCUCCUACUCAGGUUAACCUUACGGGGCGGAUCACUUGAUACAGGCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773885.1
ncRNA:24   CCUCGCCUAGCAAACUAUGUCCAA   1
  ||||||||||||||||||||||*|
targets:529   GGAGCGGAUCGUUUGAUACAGGCU   552

1.5 PREDICTED: Glycine max uncharacterized LOC100798836 (LOC100798836), transcript variant X2, mRNA uncharacterized LOC100798836(LOC100798836) coding protein psRNATarget
XM_006604096.2
ncRNA:24   CCUCGCCUAGCAAACUAUGUCCAA   1
  ||=*||*|*|||||||||||||||
targets:2827   GGGCCGAAACGUUUGAUACAGGUU   2850

2.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102666607), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102666607) coding protein psRNATarget